RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CMTM5Q96DZ9 223 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 PRPF18Q99633 342 aaKnown RBP21.38■■□□□ 1.01
COL13A1-208ENST00000479733 ADPGKQ9BRR6 497 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 ITGA11Q9UKX5 1188 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 ZBTB12Q9Y330 459 aaPredicted RBP21.38■■□□□ 1.01
COL13A1-208ENST00000479733 H0YIN7 160 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 PDLIM1O00151 329 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 AIM2O14862 343 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 MEX3CQ5U5Q3 659 aaKnown RBP21.37■■□□□ 1.01
COL13A1-208ENST00000479733 BSPRYQ5W0U4 402 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 PLD5Q8N7P1 536 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 ZFP28Q8NHY6 868 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 GSDMBQ8TAX9 411 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 UBA3Q8TBC4 463 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 WNK4Q96J92 1243 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 OXCT2Q9BYC2 517 aaPredicted RBP21.37■■□□□ 1.01
COL13A1-208ENST00000479733 PCDHGC3Q9UN70 934 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 TPP1O14773 563 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 TMCC1O94876 653 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 METTL18O95568 372 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 BCAR1P56945 870 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 FAM151AQ8WW52 585 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 PGBD4Q96DM1 585 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 ACSS2Q9NR19 701 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 ZNF358Q9NW07 568 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 LRRC37AA6NMS7 1700 aa21.37■■□□□ 1.01
COL13A1-208ENST00000479733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-208ENST00000479733 F7P08709 466 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-208ENST00000479733 KCNA2P16389 499 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 CDH5P33151 784 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-208ENST00000479733 SNAPC2Q13487 334 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 KBTBD6Q86V97 674 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 SDCBP2Q9H190 292 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 PTTG2Q9NZH5 202 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 SPDYE16A6NNV3 312 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-208ENST00000479733 DNAJA2O60884 412 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 RGS20O76081 388 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 ATG7O95352 703 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 L1CAMP32004 1257 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 MRPS22P82650 360 aaKnown RBP21.36■■□□□ 1.01
COL13A1-208ENST00000479733 MYLK3Q32MK0 819 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 VSIG10LQ86VR7 867 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 PIWIL1Q96J94 861 aaKnown RBP21.36■■□□□ 1.01
COL13A1-208ENST00000479733 SLC38A10Q9HBR0 1119 aa21.36■■□□□ 1.01
COL13A1-208ENST00000479733 SRGAP2CP0DJJ0 459 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 SRGAP2BP0DMP2 458 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 SERPINB5P36952 375 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 ASPAP45381 313 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 TMED1Q13445 227 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 ITGA9Q13797 1035 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 PDE1CQ14123 709 aaPredicted RBP21.35■■□□□ 1.01
COL13A1-208ENST00000479733 DUOXA2Q1HG44 320 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 PQLC1Q8N2U9 271 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 RAB3IL1Q8TBN0 382 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 SIGLEC10Q96LC7 697 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 RNF157Q96PX1 679 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 EBNA1BP2Q99848 306 aaKnown RBP21.35■■□□□ 1.01
COL13A1-208ENST00000479733 HMGXB4Q9UGU5 601 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 ADCY6O43306 1168 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 ZBTB14O43829 449 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 DGKIO75912 1065 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 ALDOAP04075 364 aaKnown RBP21.35■■□□□ 1.01
COL13A1-208ENST00000479733 PCSK6P29122 969 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 CCND2P30279 289 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 GABRB2P47870 512 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 XIAPP98170 497 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 CDK18Q07002 472 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 TFDP2Q14188 446 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 C6orf52Q5T4I8 152 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 KLHL23Q8NBE8 558 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 MOCOSQ96EN8 888 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 ATXN7L3BQ96GX2 97 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 CLMNQ96JQ2 1002 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 SORT1Q99523 831 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 NRDE2Q9H7Z3 1164 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 NRXN2Q9P2S2 1712 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 GOLGA8QA0A0J9YX86 632 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 GOLGA8OA6NCC3 632 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 FAM159BA6NKW6 160 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 GOLGA8NF8WBI6 632 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 CFLARO15519 480 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 ATP9BO43861 1147 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 PRPSAP2O60256 369 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 CRTAMO95727 393 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 PIM1P11309 404 aaPredicted RBP21.35■■□□□ 1.01
COL13A1-208ENST00000479733 COX4I1P13073 169 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 PDGFRAP16234 1089 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 PCLAFQ15004 111 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 TNS4Q8IZW8 715 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 FNIP1Q8TF40 1166 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 SNRNP27Q8WVK2 155 aaKnown RBP21.35■■□□□ 1.01
COL13A1-208ENST00000479733 LRGUKQ96M69 825 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 PORCNQ9H237 461 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 COPS7BQ9H9Q2 264 aaPredicted RBP21.35■■□□□ 1.01
COL13A1-208ENST00000479733 ASNSD1Q9NWL6 643 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 NDUFA13Q9P0J0 144 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 BTBD7Q9P203 1132 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 ADGRA2Q96PE1 1338 aa21.35■■□□□ 1.01
COL13A1-208ENST00000479733 WDR27A2RRH5 827 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms