RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 GGCXP38435 758 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 KCNQ1P51787 676 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 NNTQ13423 1086 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 GPR158Q5T848 1215 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 RSRC2Q7L4I2 434 aaKnown RBP13.63□□□□□ -0.23
CHD3-210ENST00000479080 PEX26Q7Z412 305 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 NPAS3Q8IXF0 933 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 SYCE1Q8N0S2 351 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 PYROXD2Q8N2H3 581 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 DEFB123Q8N688 67 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 LEMD2Q8NC56 503 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.63□□□□□ -0.23
CHD3-210ENST00000479080 RNF139Q8WU17 664 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 MRPS31Q92665 395 aaKnown RBP13.63□□□□□ -0.23
CHD3-210ENST00000479080 RSPRY1Q96DX4 576 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 MYEOVQ96EZ4 313 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 P2RY11Q96G91 374 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 SERPINB11Q96P15 392 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 TRIM62Q9BVG3 475 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 ADAM7Q9H2U9 754 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 ZWILCHQ9H900 591 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 OLA1Q9NTK5 396 aaKnown RBP13.63□□□□□ -0.23
CHD3-210ENST00000479080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHD3-210ENST00000479080 DNAI1Q9UI46 699 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 LCMT1Q9UIC8 334 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 AMFRQ9UKV5 643 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 FZD10Q9ULW2 581 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 USP18Q9UMW8 372 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 NEU3Q9UQ49 428 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 PCDHA3Q9Y5H8 950 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 CLUHO75153 1309 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 GRXCR2A6NFK2 248 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 FAM72CH0Y354 149 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 PSTPIP1O43586 416 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 STC2O76061 302 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 KLKB1P03952 638 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 TNNT1P13805 278 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 HOXB8P17481 243 aaPredicted RBP13.62□□□□□ -0.23
CHD3-210ENST00000479080 ATP5C1P36542 298 aaKnown RBP13.62□□□□□ -0.23
CHD3-210ENST00000479080 DNA2P51530 1060 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 TBX4P57082 545 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 SLC7A9P82251 487 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 SCAPQ12770 1279 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
CHD3-210ENST00000479080 CCDC85BQ15834 202 aaPredicted RBP13.62□□□□□ -0.23
CHD3-210ENST00000479080 CLUL1Q15846 466 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 FAM72AQ5TYM5 149 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 PIK3R6Q5UE93 754 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 LRRC38Q5VT99 294 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 PAPD7Q5XG87 772 aaKnown RBP13.62□□□□□ -0.23
CHD3-210ENST00000479080 NADSYN1Q6IA69 706 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 FAM72DQ6L9T8 149 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 SCYL2Q6P3W7 929 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 ELMSAN1Q6PJG2 1045 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 FAM72BQ86X60 149 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 SMRP1Q8NCR6 262 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 FAM71BQ8TC56 605 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 SUSD6Q92537 303 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 RAPGEF5Q92565 580 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 NTAN1Q96AB6 310 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 KCTD15Q96SI1 283 aaPredicted RBP13.62□□□□□ -0.23
CHD3-210ENST00000479080 NAPGQ99747 312 aaPredicted RBP13.62□□□□□ -0.23
CHD3-210ENST00000479080 TASP1Q9H6P5 420 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 PIDD1Q9HB75 910 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 RRAGDQ9NQL2 400 aaPredicted RBP13.62□□□□□ -0.23
CHD3-210ENST00000479080 SMPD4Q9NXE4 827 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 DNMT3LQ9UJW3 386 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 CCL26Q9Y258 94 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 TLR6Q9Y2C9 796 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 JRKLQ9Y4A0 524 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 CPQQ9Y646 472 aa13.62□□□□□ -0.23
CHD3-210ENST00000479080 PI4K2BG5E9Z4 385 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 H3BQ06 376 aaPredicted RBP13.61□□□□□ -0.23
CHD3-210ENST00000479080 RNF8O76064 485 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 FGF19O95750 216 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 MBL2P11226 248 aaPredicted RBP13.61□□□□□ -0.23
CHD3-210ENST00000479080 FOSL2P15408 326 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 HDCP19113 662 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 FCARP24071 287 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 ADRA1BP35368 520 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 SEMA3BQ13214 749 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 ZNF211Q13398 564 aaPredicted RBP13.61□□□□□ -0.23
CHD3-210ENST00000479080 PPP2R5DQ14738 602 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 Q6ZNB5 142 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 POLNQ7Z5Q5 900 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 RHOT1Q8IXI2 618 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 KATNAL2Q8IYT4 538 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 ZNF683Q8IZ20 524 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 COG1Q8WTW3 980 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 TEKT4Q8WW24 435 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 TSC1Q92574 1164 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 USP13Q92995 863 aaPredicted RBP13.61□□□□□ -0.23
CHD3-210ENST00000479080 LRRC3BQ96PB8 259 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 GCNAQ96QF7 691 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 MYADMQ96S97 322 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 PSMB7Q99436 277 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 TKTL2Q9H0I9 626 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 POMKQ9H5K3 350 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms