RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 NAF1Q96HR8 494 aaKnown RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 NMUR2Q9GZQ4 415 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 KLC2Q9H0B6 622 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 PPCSQ9HAB8 311 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 SEPT10Q9P0V9 454 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 CITO14578 2027 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 TGM2P21980 687 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 GNL1P36915 607 aaPredicted RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 PEX19P40855 299 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 BST1Q10588 318 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 SNAPC2Q13487 334 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 NCBP2-AS2Q69YL0 99 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 SHKBP1Q8TBC3 707 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 INPP5DQ92835 1189 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 FAM149B1Q96BN6 582 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 RTP4Q96DX8 246 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 OXNAD1Q96HP4 312 aaPredicted RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 C11orf84Q9BUA3 381 aaPredicted RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 PHACTR1Q9C0D0 580 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 KIAA1257Q9ULG3 409 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 SMIM28A0A1B0GU29 152 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 A6NJR5 290 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 MEIS3P2A8K0S8 358 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 NDC80O14777 642 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 APOEP02649 317 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 YBX3P16989 372 aaKnown RBP eCLIP11.17□□□□□ -0.627e-11■■□□□ 13.3
VPS52-217ENST00000478934 SESN2P58004 480 aaPredicted RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 RCN2Q14257 317 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 CRYMQ14894 314 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 CASC4Q6P4E1 433 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 SLC27A1Q6PCB7 646 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 HFE2Q6ZVN8 426 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 OSTM1Q86WC4 334 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 DEFB106AQ8N104 65 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 NDUFAF2Q8N183 169 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 PDCD7Q8N8D1 485 aaKnown RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 RNF169Q8NCN4 708 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 NPLOC4Q8TAT6 608 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 CLPTM1LQ96KA5 538 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 TRIM6Q9C030 488 aaPredicted RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 IQCGQ9H095 443 aaKnown RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 VTA1Q9NP79 307 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 PIN4Q9Y237 131 aaKnown RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 MDM4O15151 490 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 GYG2O15488 501 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 MFSD11O43934 449 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 ATP5HO75947 161 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 ENO1P06733 434 aaKnown RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 SNRPAP09012 282 aaKnown RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 EPHX2P34913 555 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 TUBP50607 506 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 AFF1P51825 1210 aaKnown RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 ADIGQ0VDE8 80 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 CHI3L2Q15782 390 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 DPYSL2Q16555 572 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 DCAF6Q58WW2 860 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 ACSBG2Q5FVE4 666 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 SYPL2Q5VXT5 272 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 EP400NLQ6ZTU2 488 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 ARID3BQ8IVW6 561 aaPredicted RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 VPS52Q8N1B4 723 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS52-217ENST00000478934 TEKT4Q8WW24 435 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 ALKBH8Q96BT7 664 aaKnown RBP11.17□□□□□ -0.62
VPS52-217ENST00000478934 FAXDC2Q96IV6 333 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 ZNF670Q9BS34 389 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 DONSONQ9NYP3 566 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 PLLPQ9Y342 182 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 PSAT1Q9Y617 370 aa11.17□□□□□ -0.62
VPS52-217ENST00000478934 KPNA7A9QM74 516 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 CREB3O43889 395 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 USP12O75317 370 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 STAU1O95793 577 aaKnown RBP11.16□□□□□ -0.62
VPS52-217ENST00000478934 SMIM10L2AP0DMW4 78 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 SMIM10L2BP0DMW5 78 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 PRKCHP24723 683 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 TMPRSS15P98073 1019 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 KDSRQ06136 332 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 NME3Q13232 169 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 RCN1Q15293 331 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 FBXO47Q5MNV8 452 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 OTUD1Q5VV17 481 aaPredicted RBP11.16□□□□□ -0.62
VPS52-217ENST00000478934 ALKAL1Q6UXT8 129 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 ATG14Q6ZNE5 492 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 C4orf50Q6ZRC1 276 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 GPR142Q7Z601 462 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 RPAINQ86UA6 219 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 PIGZQ86VD9 579 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 ADGRF2Q8IZF7 708 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 ANKRD52Q8NB46 1076 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 BEST2Q8NFU1 509 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 PTCD3Q96EY7 689 aaKnown RBP11.16□□□□□ -0.62
VPS52-217ENST00000478934 MAML3Q96JK9 1138 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 ZFP42Q96MM3 310 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 EBNA1BP2Q99848 306 aaKnown RBP11.16□□□□□ -0.62
VPS52-217ENST00000478934 ANLNQ9NQW6 1124 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 TAS2R1Q9NYW7 299 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 FAM72CH0Y354 149 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 H3BRJ5 948 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms