RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 SWSAP1Q6NVH7 229 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 LRIG3Q6UXM1 1119 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 RBM44Q6ZP01 1051 aaKnown RBP1.67□□□□□ -2.14
SRRM1-211ENST00000478890 USP43Q70EL4 1123 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 KRT27Q7Z3Y8 459 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.67□□□□□ -2.14
SRRM1-211ENST00000478890 NR2C2APQ86WQ0 139 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 SKAP1Q86WV1 359 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 SDR16C5Q8N3Y7 309 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 CCDC33Q8N5R6 958 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 SLC44A5Q8NCS7 719 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 CCDC150Q8NCX0 1101 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 FAM156AQ8NDB6 213 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 MBD3L2Q8NHZ7 208 aaPredicted RBP1.67□□□□□ -2.14
SRRM1-211ENST00000478890 AKAP1Q92667 903 aaKnown RBP eCLIP1.67□□□□□ -2.14
SRRM1-211ENST00000478890 CTHRC1Q96CG8 243 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 GRAMD1AQ96CP6 724 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 LRRC46Q96FV0 321 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 SNX22Q96L94 193 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 SENP7Q9BQF6 1050 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 TM2D2Q9BX73 214 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 CHST8Q9H2A9 424 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 SLCO5A1Q9H2Y9 848 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 AAMDCQ9H7C9 122 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 SAP30LQ9HAJ7 183 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 MLXIPQ9HAP2 919 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 PNPLA8Q9NP80 782 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 SEMA4BQ9NPR2 832 aaPredicted RBP1.67□□□□□ -2.14
SRRM1-211ENST00000478890 VPS45Q9NRW7 570 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 ZBTB40Q9NUA8 1239 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 TCEAL9Q9UHQ7 104 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 ICKQ9UPZ9 632 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 CORO2BQ9UQ03 480 aa1.67□□□□□ -2.14
SRRM1-211ENST00000478890 ZNF335Q9H4Z2 1342 aaPredicted RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 GOLGA6CA6NDK9 693 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 GOLGA6BA6NDN3 693 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 PRSS44E7EML9 344 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 GOLIM4O00461 696 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 RRHO14718 337 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 ZSCAN9O15535 394 aaPredicted RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 FRS3O43559 492 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 CNOT3O75175 753 aaKnown RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 COQ9O75208 318 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 RFPL1O75677 317 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 SCGB1D2O95969 90 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 NGFRP08138 427 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 GOLGA6DP0CG33 693 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 IDEP14735 1019 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 IL1R1P14778 569 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 ATF7P17544 494 aaPredicted RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 MATN1P21941 496 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 NDUFS1P28331 727 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 HOXA7P31268 230 aaPredicted RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 IGHMBP2P38935 993 aaKnown RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 PBX1P40424 430 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 ENTPD1P49961 510 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 FAM193AP78312 1265 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 ZXDBP98169 803 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 SRSF1Q07955 248 aaKnown RBP eCLIP1.66□□□□□ -2.147e-9■■■□□ 16
SRRM1-211ENST00000478890 CBFBQ13951 182 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 DLGAP5Q15398 846 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 ANXA2RQ3ZCQ2 193 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 C6orf10Q5SRN2 563 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 FAM102BQ5T8I3 360 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 MANEALQ5VSG8 457 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 LIPMQ5VYY2 423 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 GRHL2Q6ISB3 625 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 PDXDC1Q6P996 788 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 TFAP2DQ7Z6R9 452 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 PIP4P1Q86T03 277 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 TTC30AQ86WT1 665 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 ADHFE1Q8IWW8 467 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.66□□□□□ -2.149e-6■■■□□ 15.9
SRRM1-211ENST00000478890 ABHD5Q8WTS1 349 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 CENPIQ92674 756 aaPredicted RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 RUNDC1Q96C34 613 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 IQCDQ96DY2 449 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 MED30Q96HR3 178 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 CTAGE1Q96RT6 745 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 NTPCRQ9BSD7 190 aaKnown RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 POLR3GLQ9BT43 218 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 TTLL2Q9BWV7 592 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 APOL5Q9BWW9 433 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 RNF26Q9BY78 433 aaPredicted RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 PCGF6Q9BYE7 350 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 MOV10Q9HCE1 1003 aaKnown RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 ABHD10Q9NUJ1 306 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 GOLGA6AQ9NYA3 693 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 TMOD4Q9NZQ9 345 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 MSRB1Q9NZV6 116 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 COL20A1Q9P218 1284 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 L1RE1Q9UN81 338 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 PCDHGB6Q9Y5F9 930 aa1.66□□□□□ -2.14
SRRM1-211ENST00000478890 ZCCHC6Q5VYS8 1495 aaKnown RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 FRMPD2Q68DX3 1309 aaPredicted RBP1.66□□□□□ -2.14
SRRM1-211ENST00000478890 A0A1W2PPC1 479 aa1.65□□□□□ -2.15
SRRM1-211ENST00000478890 RHPN2P1A8MT19 583 aa1.65□□□□□ -2.15
SRRM1-211ENST00000478890 VSTM5A8MXK1 200 aa1.65□□□□□ -2.15
SRRM1-211ENST00000478890 RHODO00212 210 aa1.65□□□□□ -2.15
SRRM1-211ENST00000478890 TPP1O14773 563 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms