RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 CFAP57Q96MR6 1250 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 RBM14Q96PK6 669 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 UQCC2Q9BRT2 126 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ACAT2Q9BWD1 397 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CNOT10Q9H9A5 744 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CHMP2BQ9UQN3 213 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CARD8Q9Y2G2 431 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 SNX9Q9Y5X1 595 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 FER1L6Q2WGJ9 1857 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ATAD5Q96QE3 1844 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 EVPLQ92817 2033 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CASQ2O14958 399 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ATP2A1O14983 1001 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 DIAPH2O60879 1101 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 UBOX5O94941 541 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 F7P08709 466 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 TFE3P19532 575 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 MIPP30301 263 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 PAPOLAP51003 745 aaKnown RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 C1QBPQ07021 282 aaKnown RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 FNBP1LQ5T0N5 605 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 BSPRYQ5W0U4 402 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 TRMT10CQ7L0Y3 403 aaKnown RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 KDELC2Q7Z4H8 507 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ZNF677Q86XU0 584 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 RBM12BQ8IXT5 1001 aaKnown RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 SLAIN1Q8ND83 568 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ARMC2Q8NEN0 867 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CHAC2Q8WUX2 184 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 C1orf74Q96LT6 269 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CEP41Q9BYV8 373 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 SETD4Q9NVD3 440 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 MCM8Q9UJA3 840 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 PCDHB3Q9Y5E6 796 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 MCM3APO60318 1980 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 hCG_1818297A0A087WSY0 165 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 IGKV6D-21A0A0A0MT36 114 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 A6NNZ2 444 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 A8MUI8 341 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 E5RJQ4 531 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 J3KRW8 73 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ASAP2O43150 1006 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 PSTPIP1O43586 416 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 NDUFB5O43674 189 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 MICAL2O94851 1124 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 SNUPNO95149 360 aaKnown RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 MT-ND3P03897 115 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ARF4P18085 180 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CA4P22748 312 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 FOXN2P32314 431 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ICAM3P32942 547 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CDKN2BP42772 138 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 MTHFRP42898 656 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 IREB2P48200 963 aaKnown RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 EFNA5P52803 228 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 NDST1P52848 882 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 RAD23BP54727 409 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CDH6P55285 790 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 TFDP3Q5H9I0 405 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CCDC149Q6ZUS6 474 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 RAPH1Q70E73 1250 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ARMCX2Q7L311 632 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 C12orf50Q8NA57 414 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 IPMKQ8NFU5 416 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 PRCCQ92733 491 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 C18orf25Q96B23 403 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 HPDLQ96IR7 371 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 COG8Q96MW5 612 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 PGLYRP2Q96PD5 576 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CDHR5Q9HBB8 845 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 GOLGA2P5Q9HBQ8 144 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 NKIRAS1Q9NYS0 192 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 DGKBQ9Y6T7 804 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 MOXD2PA6NHM9 499 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CCT8L1PA6NM43 557 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 TBKBP1A7MCY6 615 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 H7C0C1 242 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ACKR2O00590 384 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ABLIM1O14639 778 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 FAM155BO75949 473 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 NPTXRO95502 500 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CPP00450 1065 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CALB1P05937 261 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 PDGFRAP16234 1089 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 IGFBP6P24592 240 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 KLRC2P26717 231 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 RPA3P35244 121 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 KCNJ2P63252 427 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 GABREP78334 506 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 MBTD1Q05BQ5 628 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 MXD4Q14582 209 aaPredicted RBP6.28□□□□□ -1.4
SH3D19-207ENST00000478503 CLUL1Q15846 466 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 EMC10Q5UCC4 262 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ANGPTL8Q6UXH0 198 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 RCOR2Q8IZ40 523 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 KIRREL3Q8IZU9 778 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 NUP93Q8N1F7 819 aa6.28□□□□□ -1.4
SH3D19-207ENST00000478503 ANKS4BQ8N8V4 417 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms