RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PRAMEF2O60811 474 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 PRKCGP05129 697 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 ITGA2BP08514 1039 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 NHLRC4P0CG21 123 aaPredicted RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 MATN1P21941 496 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 KLRK1P26718 216 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 AKT1P31749 480 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 SERPINF1P36955 418 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 IGHMBP2P38935 993 aaKnown RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 JAK3P52333 1124 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 RAE1P78406 368 aaKnown RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 TFF2Q03403 129 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 SLC10A2Q12908 348 aaPredicted RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 CBFBQ13951 182 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 LARS2Q15031 903 aaKnown RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 GRAMD1BQ3KR37 738 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 ATPAF1Q5TC12 328 aaPredicted RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 MSANTD2Q6P1R3 559 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 CCDC174Q6PII3 467 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 EID2BQ96D98 161 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 RITA1Q96K30 269 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 ASB2Q96Q27 587 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 PAAF1Q9BRP4 392 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 KATNAL1Q9BW62 490 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 MYH16Q9H6N6 1097 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 PTPRHQ9HD43 1115 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 HERC5Q9UII4 1024 aaKnown RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 VPS4AQ9UN37 437 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 SCAF8Q9UPN6 1271 aaKnown RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 UBE2J1Q9Y385 318 aaPredicted RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 CCDC187A0A096LP49 1063 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 TTC34A8MYJ7 566 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 TISP43B9A030 160 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 PRRT4C9JH25 899 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 TMEM232C9JQI7 657 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 TRIM38O00635 465 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 TCEA3O75764 348 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 CER1O95813 267 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 MBPP02686 304 aaPredicted RBP4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 SLC3A2P08195 630 aaKnown RBP4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 ALADP13716 330 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 DUSP1P28562 367 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 CD38P28907 300 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 CHKAP35790 457 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 WDR5P61964 334 aaKnown RBP4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 CC2D1BQ5T0F9 858 aaKnown RBP4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 ACSM6Q6P461 480 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 KLHL17Q6TDP4 642 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 TRABD2AQ86V40 505 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 EXOC8Q8IYI6 725 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 C16orf71Q8IYS4 520 aaPredicted RBP4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 CACNA2D3Q8IZS8 1091 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 OR52L2PQ8NGH6 319 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 SLC22A17Q8WUG5 538 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 RSC1A1Q92681 617 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 KAZALD1Q96I82 304 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 HIC2Q96JB3 615 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 ABHD10Q9NUJ1 306 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 MAFFQ9ULX9 164 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 NFU1Q9UMS0 254 aa4.51□□□□□ -1.69
SMARCA1-204ENST00000478420 SPATA31A1Q5TZJ5 1347 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 GXYLT2A0PJZ3 443 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 IFRD1O00458 451 aaPredicted RBP4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 RPP40O75818 363 aaKnown RBP4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 CYP2A6P11509 494 aaPredicted RBP4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 ATF7P17544 494 aaPredicted RBP4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 FOXO1Q12778 655 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 CNGA3Q16281 694 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 TUBB8Q3ZCM7 444 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 RANBP10Q6VN20 620 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 CCDC117Q8IWD4 279 aaPredicted RBP4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 ZNF764Q96H86 408 aaPredicted RBP4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 FAR2Q96K12 515 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 RTKNQ9BST9 563 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 PAGR1Q9BTK6 254 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 RNF26Q9BY78 433 aaPredicted RBP4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 MAGEH1Q9H213 219 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 PCDHB7Q9Y5E2 793 aa4.5□□□□□ -1.69
SMARCA1-204ENST00000478420 KIF28PB7ZC32 967 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 M0QZQ0 153 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 RBMXL2O75526 392 aaKnown RBP4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 RNF8O76064 485 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 ACTL6BO94805 426 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 GYS1P13807 737 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 SLC14A1Q13336 389 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 PFKFB3Q16875 520 aaPredicted RBP4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 AWAT1Q58HT5 328 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 ZNF569Q5MCW4 686 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 GORABQ5T7V8 394 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 ERAP2Q6P179 960 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 SYCE2Q6PIF2 218 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 ZNF782Q6ZMW2 699 aaPredicted RBP4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 SLC44A2Q8IWA5 706 aaPredicted RBP4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 MYCT1Q8N699 235 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 GLMPQ8WWB7 406 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 CCT6BQ92526 530 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 AKAP1Q92667 903 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 REXO5Q96IC2 774 aaKnown RBP4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 CDCP1Q9H5V8 836 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms