RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 AP1M2Q9Y6Q5 423 aa3.73□□□□□ -1.81
FNDC3B-209ENST00000478016 ARHGEF40Q8TER5 1519 aa3.73□□□□□ -1.81
FNDC3B-209ENST00000478016 MADDQ8WXG6 1647 aa3.73□□□□□ -1.81
FNDC3B-209ENST00000478016 NUP153P49790 1475 aaKnown RBP3.73□□□□□ -1.81
FNDC3B-209ENST00000478016 ZNF536O15090 1300 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ZNF335Q9H4Z2 1342 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CD109Q6YHK3 1445 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 A0A0A6YYJ9 748 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 GOLGA6L7A0A1B0GV03 622 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ARHGAP10A1A4S6 786 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 TMEM221A6NGB7 291 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ZSCAN5CA6NGD5 496 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ACOD1A6NK06 481 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ENO4A6NNW6 628 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 PRR5-ARHGAP8B1AHC4 643 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 TARM1B6A8C7 271 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 STX16-NPEPL1H3BU86 382 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 VWA5AO00534 786 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 MAGEB3O15480 346 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 MTSS1O43312 755 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CYTH3O43739 400 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 OPHN1O60890 802 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 OFD1O75665 1012 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ADCY5O95622 1261 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ECDO95905 644 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 RB1P06400 928 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 S100A9P06702 114 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ZFYP08048 801 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SNRNP70P08621 437 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CYP3A4P08684 503 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 TPM1P09493 284 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SNRPA1P09661 255 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 NR2F1P10589 423 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ATP1A3P13637 1013 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 HSPA6P17066 643 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 DNAJB1P25685 340 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 IDUAP35475 653 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ACAA2P42765 397 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 FNTAP49354 379 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 PPP2CBP62714 309 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 PPP2CAP67775 309 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 MRPS15P82914 257 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 PRKCZQ05513 592 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 GALNT1Q10472 559 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SEMA5AQ13591 1074 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CUL4BQ13620 913 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 GIT2Q14161 759 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 MAPRE2Q15555 327 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 DPYSL2Q16555 572 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 MAPKAPK3Q16644 382 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 TMEM266Q2M3C6 531 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 TDRD12Q587J7 1177 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 XKR3Q5GH77 459 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ZBTB41Q5SVQ8 909 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 AGBL4Q5VU57 503 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 NAA16Q6N069 864 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ARHGAP11AQ6P4F7 1023 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 KLHDC10Q6PID8 442 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ZYG11AQ6WRX3 759 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ZNF783Q6ZMS7 281 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 MEX3BQ6ZN04 569 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 LARP4Q71RC2 724 aaKnown RBP eCLIP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 DNAJB7Q7Z6W7 309 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CEP57Q86XR8 500 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CCDC170Q8IYT3 715 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SPARTQ8N0X7 666 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 BCL6BQ8N143 479 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 TSPYL6Q8N831 410 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 NIPA2Q8N8Q9 360 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 KCNH5Q8NCM2 988 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CLRN3Q8NCR9 226 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SIMC1Q8NDZ2 872 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 LILRB4Q8NHJ6 448 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 GDAP1Q8TB36 358 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CCDC110Q8TBZ0 833 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CREB3L4Q8TEY5 395 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 ASB12Q8WXK4 309 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CASP10Q92851 521 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 GFM2Q969S9 779 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 EXOC4Q96A65 974 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 LRRC59Q96AG4 307 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 MIEF2Q96C03 454 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SGF29Q96ES7 293 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 DYDC2Q96IM9 177 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 VPS50Q96JG6 964 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 HIST1H2AHQ96KK5 128 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 PPP1R13BQ96KQ4 1090 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 C20orf173Q96LM9 149 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 DACH2Q96NX9 599 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 HIST1H2AJQ99878 128 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 GCOM2Q9BZD3 368 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 HAPLN2Q9GZV7 340 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SIL1Q9H173 461 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 C1orf21Q9H246 121 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 MMADHCQ9H3L0 296 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 XKR8Q9H6D3 395 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 PSTPIP2Q9H939 334 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SEC61A2Q9H9S3 476 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 A1CFQ9NQ94 594 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms