RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 B3GALT4O96024 378 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 BDNFP23560 247 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 TNFRSF4P43489 277 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 PXNP49023 591 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 GPR15P49685 360 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 ASIC1P78348 528 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 SHC2P98077 582 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 GAD2Q05329 585 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 SF3A2Q15428 464 aaKnown RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 SDHAF4Q5VUM1 108 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 LPCAT2Q7L5N7 544 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 NUP93Q8N1F7 819 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 TMEM130Q8N3G9 435 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 XXYLT1Q8NBI6 393 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 WHAMMQ8TF30 809 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 MYLPFQ96A32 169 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 EAF1Q96JC9 268 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CNOT6LQ96LI5 555 aaKnown RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CBWD1Q9BRT8 395 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 EDEM2Q9BV94 578 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 TTLL2Q9BWV7 592 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 LSM14BQ9BX40 385 aaKnown RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 NUSAP1Q9BXS6 441 aaKnown RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 TMEM9BQ9NQ34 198 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 UBP1Q9NZI7 540 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 HSPBP1Q9NZL4 362 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 GCNT4Q9P109 453 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 MMP17Q9ULZ9 603 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 SH3BP1Q9Y3L3 701 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 WNT6Q9Y6F9 365 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CEP250Q9BV73 2442 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 ATG2BQ96BY7 2078 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 E2F8A0AVK6 867 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 BCLAF3A2AJT9 711 aaKnown RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 A8MXQ7 604 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 LEFTY2O00292 366 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 SPTLC2O15270 562 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CUTAO60888 179 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 KIF20AO95235 890 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 ECEL1O95672 775 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 PDGFRBP09619 1106 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 DLATP10515 647 aaKnown RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 MBL2P11226 248 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 SYT1P21579 422 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 BMP6P22004 513 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 YWHAQP27348 245 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 GRIA2P42262 883 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 RESTQ13127 1097 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CAMK2GQ13555 558 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 SNRNP35Q16560 246 aaKnown RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 FAM26FQ5R3K3 315 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 SLC36A4Q6YBV0 504 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 TRAPPC11Q7Z392 1133 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 PDILTQ8N807 584 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 GOLM1Q8NBJ4 401 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CEP76Q8TAP6 659 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF507Q8TCN5 953 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 USP33Q8TEY7 942 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CCDC47Q96A33 483 aaKnown RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CHFRQ96EP1 664 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CYP2S1Q96SQ9 504 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 PKMYT1Q99640 499 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 CGRRF1Q99675 332 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 MED10Q9BTT4 135 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 PANK2Q9BZ23 570 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 DUSP15Q9H1R2 295 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 GDF2Q9UK05 429 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-214ENST00000477152 KIAA1549LQ6ZVL6 1849 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 EML5Q05BV3 1969 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 THADAQ6YHU6 1953 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 MYO16Q9Y6X6 1858 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 C2orf78A6NCI8 922 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 TMEM8BA6NDV4 472 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 KCNK5O95279 499 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 YEATS4O95619 227 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 PTPN1P18031 435 aaKnown RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 HOXD12P35452 270 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 GMPRP36959 345 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 DHPSP49366 369 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 ATXN3P54252 364 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 PSMC1P62191 440 aaKnown RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 HNRNPDQ14103 355 aaKnown RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 PSMD6Q15008 389 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 WDR72Q3MJ13 1102 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 C2orf27AQ580R0 203 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 MDH1BQ5I0G3 518 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 RPS26P11Q5JNZ5 115 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 HECTD3Q5T447 861 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 N4BP2L1Q5TBK1 243 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 PMS2CLQ68D20 193 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 ATL3Q6DD88 541 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 CNNM4Q6P4Q7 775 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 BNC2Q6ZN30 1099 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 USP49Q70CQ1 688 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 CHSY3Q70JA7 882 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 FILIP1Q7Z7B0 1213 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 TADA2BQ86TJ2 420 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 OSTM1Q86WC4 334 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 TTC30AQ86WT1 665 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms