RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SCAPQ12770 1279 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 SLC10A2Q12908 348 aaPredicted RBP15□□□□□ -0.01
COL4A6-206ENST00000477085 SEMA3BQ13214 749 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 FAM182AQ5T1J6 154 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 C1orf228Q6PIY5 440 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 ZDHHC24Q6UX98 284 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 FBXO32Q969P5 355 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 RUNDC3BQ96NL0 473 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 TMEM121Q9BTD3 319 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 TTLL2Q9BWV7 592 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 TKTL2Q9H0I9 626 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 WDCPQ9H6R7 721 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 MRPL17Q9NRX2 175 aaKnown RBP15□□□□□ -0.01
COL4A6-206ENST00000477085 DRG1Q9Y295 367 aaKnown RBP15□□□□□ -0.01
COL4A6-206ENST00000477085 CHD9Q3L8U1 2897 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 TLL1O43897 1013 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 RTN3O95197 1032 aaPredicted RBP14.99□□□□□ -0.01
COL4A6-206ENST00000477085 ZDHHC11BP0C7U3 371 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 ZSCAN5DPP0CG00 497 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 CTSAP10619 480 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 MYOGP15173 224 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 HMGA1P17096 107 aaKnown RBP14.99□□□□□ -0.01
COL4A6-206ENST00000477085 KLRC2P26717 231 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 TUFMP49411 452 aaKnown RBP14.99□□□□□ -0.01
COL4A6-206ENST00000477085 PTK6Q13882 451 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 TPGS2Q68CL5 300 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 ALLCQ8N6M5 410 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 LRRN4Q8WUT4 740 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 CCDC114Q96M63 670 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 TRIM62Q9BVG3 475 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 RAB17Q9H0T7 212 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 CYP4F11Q9HBI6 524 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 RXFP1Q9HBX9 757 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 ZDHHC18Q9NUE0 388 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 ARHGEF38Q9NXL2 777 aa14.99□□□□□ -0.01
COL4A6-206ENST00000477085 CARNS1A5YM72 827 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 APOL1O14791 398 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 ERLIN1O75477 346 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 MAP3K6O95382 1288 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 ITGAVP06756 1048 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 CNPP09543 421 aaKnown RBP14.98□□□□□ -0.01
COL4A6-206ENST00000477085 RARGP13631 454 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 DNAJB1P25685 340 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 GDF10P55107 478 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 ERVFC1P60507 584 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 GBE1Q04446 702 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 CUL1Q13616 776 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 TFDP2Q14188 446 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 NOMO1Q15155 1222 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 C9orf50Q5SZB4 431 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 FAM109BQ6ICB4 259 aaPredicted RBP14.98□□□□□ -0.01
COL4A6-206ENST00000477085 MSANTD2Q6P1R3 559 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 EIF1ADQ8N9N8 165 aaKnown RBP14.98□□□□□ -0.01
COL4A6-206ENST00000477085 TTC13Q8NBP0 860 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 RNF139Q8WU17 664 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 ALG13Q9NP73 1137 aaKnown RBP14.98□□□□□ -0.01
COL4A6-206ENST00000477085 ARHGEF4Q9NR80 690 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL4A6-206ENST00000477085 COMMD8Q9NX08 183 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 FNIP2Q9P278 1114 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 HSFX1Q9UBD0 423 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 MAGED2Q9UNF1 606 aaPredicted RBP14.98□□□□□ -0.01
COL4A6-206ENST00000477085 ZNF148Q9UQR1 794 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 CHD7Q9P2D1 2997 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 GREB1Q4ZG55 1949 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 GRXCR1A8MXD5 290 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 KCNU1A8MYU2 1149 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 CREB3O43889 395 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 SPATA31D3P0C874 917 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 BMPR1AP36894 532 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 GGCXP38435 758 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 NRLP54845 237 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 AIF1P55008 147 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 EIF3EP60228 445 aaKnown RBP14.98□□□□□ -0.01
COL4A6-206ENST00000477085 DPYSQ14117 519 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 PPP1R7Q15435 360 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 EFHC2Q5JST6 749 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 NCBP2-AS2Q69YL0 99 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 SPATA31D4Q6ZUB0 917 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 UNC45BQ8IWX7 931 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 NETO2Q8NC67 525 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 DPF3Q92784 378 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 CLIC5Q9NZA1 410 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 FEZ2Q9UHY8 353 aaPredicted RBP14.98□□□□□ -0.01
COL4A6-206ENST00000477085 XPO7Q9UIA9 1087 aaKnown RBP14.98□□□□□ -0.01
COL4A6-206ENST00000477085 RASAL2Q9UJF2 1139 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 YIPF1Q9Y548 306 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 HEY1Q9Y5J3 304 aa14.98□□□□□ -0.01
COL4A6-206ENST00000477085 MYO16Q9Y6X6 1858 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 LINC01553A4QN01 128 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 MAP2K7O14733 419 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 TGM2P21980 687 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 GBP1P32455 592 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 SYDE1Q6ZW31 735 aaPredicted RBP14.97□□□□□ -0.01
COL4A6-206ENST00000477085 SND1Q7KZF4 910 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL4A6-206ENST00000477085 ZC3H18Q86VM9 953 aaKnown RBP14.97□□□□□ -0.01
COL4A6-206ENST00000477085 GPR65Q8IYL9 337 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 ARHGAP18Q8N392 663 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 CCDC33Q8N5R6 958 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms