RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 CHRNA1P02708 482 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 TPSB2P20231 275 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 PRKCHP24723 683 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 RASSF2P50749 326 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 TPSAB1Q15661 275 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 PREPLQ4J6C6 727 aaPredicted RBP17.03■□□□□ 0.32
TMEM53-208ENST00000476724 EFHC1Q5JVL4 640 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 SH2D5Q6ZV89 423 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 LRRC6Q86X45 466 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 VPS52Q8N1B4 723 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 ERP27Q96DN0 273 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 SNX25Q9H3E2 840 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 CHKBQ9Y259 395 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 CEP350Q5VT06 3117 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 APRTP07741 180 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 EZRP15311 586 aaKnown RBP17.03■□□□□ 0.32
TMEM53-208ENST00000476724 KCNE1P15382 129 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 NEK3P51956 506 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 FAAP100Q0VG06 881 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 MTM1Q13496 603 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 XKR4Q5GH76 650 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 CCDC91Q7Z6B0 441 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 CAND1Q86VP6 1230 aaKnown RBP17.03■□□□□ 0.32
TMEM53-208ENST00000476724 PSTKQ8IV42 348 aaKnown RBP17.03■□□□□ 0.32
TMEM53-208ENST00000476724 SMG8Q8ND04 991 aaKnown RBP17.03■□□□□ 0.32
TMEM53-208ENST00000476724 ZNF296Q8WUU4 475 aaPredicted RBP17.03■□□□□ 0.32
TMEM53-208ENST00000476724 INPP5DQ92835 1189 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 DPEP3Q9H4B8 488 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 DHX35Q9H5Z1 703 aaKnown RBP17.03■□□□□ 0.32
TMEM53-208ENST00000476724 POPDC2Q9HBU9 364 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.03■□□□□ 0.32
TMEM53-208ENST00000476724 RCOR3Q9P2K3 495 aaPredicted RBP17.03■□□□□ 0.32
TMEM53-208ENST00000476724 AP4E1Q9UPM8 1137 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 IPPQ9Y573 584 aa17.03■□□□□ 0.32
TMEM53-208ENST00000476724 FRMPD3Q5JV73 1810 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 SMIM28A0A1B0GU29 152 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 GOLGA8RI6L899 631 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 AVILO75366 819 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 IL1BP01584 269 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 SNRPAP09012 282 aaKnown RBP17.02■□□□□ 0.32
TMEM53-208ENST00000476724 ETV4P43268 484 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 SARNPP82979 210 aaKnown RBP17.02■□□□□ 0.32
TMEM53-208ENST00000476724 MGAT3Q09327 533 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 PARP6Q2NL67 630 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 ARRDC4Q8NCT1 418 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 APPL2Q8NEU8 664 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 KBTBD7Q8WVZ9 684 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 CFAP36Q96G28 342 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 TNIP3Q96KP6 325 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 SENP6Q9GZR1 1112 aaPredicted RBP17.02■□□□□ 0.32
TMEM53-208ENST00000476724 TTLL3Q9Y4R7 772 aa17.02■□□□□ 0.32
TMEM53-208ENST00000476724 HACD1B0YJ81 288 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 M0QZ92 97 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 PIAS1O75925 651 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 TGDSO95455 350 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 C1QAP02745 245 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 KRT16P08779 473 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 FAM163BP0C2L3 166 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 FGFR1P11362 822 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 ADORA2BP29275 332 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 MAGEA3P43357 314 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 TAF6P49848 677 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 SV2CQ496J9 727 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 LIMS2Q7Z4I7 341 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 HACE1Q8IYU2 909 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 AGGF1Q8N302 714 aaeCLIP17.01■□□□□ 0.31
TMEM53-208ENST00000476724 PXYLP1Q8TE99 480 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 MTBPQ96DY7 904 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 SERAC1Q96JX3 654 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 TMEM237Q96Q45 408 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 LRMDAQ9H2I8 198 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 XAB2Q9HCS7 855 aaKnown RBP17.01■□□□□ 0.31
TMEM53-208ENST00000476724 SLC17A7Q9P2U7 560 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 ST3GAL5Q9UNP4 418 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 VGLL3A8MV65 326 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 HNRNPCL1O60812 293 aaKnown RBP17.01■□□□□ 0.31
TMEM53-208ENST00000476724 APOEP02649 317 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 INHAP05111 366 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 PDGFRBP09619 1106 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 YY1P25490 414 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 TWF2Q6IBS0 349 aaKnown RBP17.01■□□□□ 0.31
TMEM53-208ENST00000476724 CYS1Q717R9 158 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 CEP57Q86XR8 500 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 CCDC110Q8TBZ0 833 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 QKIQ96PU8 341 aaKnown RBP eCLIP17.01■□□□□ 0.31
TMEM53-208ENST00000476724 CSPG4P5Q96PW8 444 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 KLF6Q99612 283 aaPredicted RBP17.01■□□□□ 0.31
TMEM53-208ENST00000476724 TRIM55Q9BYV6 548 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 IQCGQ9H095 443 aaKnown RBP17.01■□□□□ 0.31
TMEM53-208ENST00000476724 SAR1AQ9NR31 198 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 TRMT13Q9NUP7 481 aaKnown RBP17.01■□□□□ 0.31
TMEM53-208ENST00000476724 MTMR10Q9NXD2 777 aa17.01■□□□□ 0.31
TMEM53-208ENST00000476724 KLF11O14901 512 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 XPO1O14980 1071 aaKnown RBP17■□□□□ 0.31
TMEM53-208ENST00000476724 HUS1O60921 280 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 KRT38O76015 456 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 PYGBP11216 843 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 LCP1P13796 627 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 CCDC130P13994 396 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 TFE3P19532 575 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms