RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ARHGEF16Q5VV41 709 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 KLC3Q6P597 504 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 GSTA5Q7RTV2 222 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 FBXO36Q8NEA4 188 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 PPP4R1Q8TF05 950 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 FAM172AQ8WUF8 416 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 PIWIL1Q96J94 861 aaKnown RBP8.67□□□□□ -1.02
VAPB-205ENST00000476395 CNBD2Q96M20 576 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 TWNKQ96RR1 684 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 PRPF18Q99633 342 aaKnown RBP8.67□□□□□ -1.02
VAPB-205ENST00000476395 PCDH18Q9HCL0 1135 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 MRPL47Q9HD33 250 aaKnown RBP8.67□□□□□ -1.02
VAPB-205ENST00000476395 JPH1Q9HDC5 661 aaPredicted RBP8.67□□□□□ -1.02
VAPB-205ENST00000476395 PLXNA1Q9UIW2 1896 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 LZTS1Q9Y250 596 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 TEX264Q9Y6I9 313 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 SCINQ9Y6U3 715 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 TRIP11Q15643 1979 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 CYB561D2O14569 222 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 AVILO75366 819 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 C6orf222P0C671 652 aaPredicted RBP8.67□□□□□ -1.02
VAPB-205ENST00000476395 RGS2P41220 211 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 CHN2P52757 468 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 ZNF200P98182 395 aaPredicted RBP8.67□□□□□ -1.02
VAPB-205ENST00000476395 CCDC110Q8TBZ0 833 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 SREK1Q8WXA9 508 aaKnown RBP8.67□□□□□ -1.02
VAPB-205ENST00000476395 ZNF512Q96ME7 567 aaPredicted RBP8.67□□□□□ -1.02
VAPB-205ENST00000476395 TTC25Q96NG3 672 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 ACAP3Q96P50 834 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 CCDC77Q9BR77 488 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 TRIM56Q9BRZ2 755 aaKnown RBP8.67□□□□□ -1.02
VAPB-205ENST00000476395 MTMR12Q9C0I1 747 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 TMCC3Q9ULS5 477 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 ZNF148Q9UQR1 794 aa8.67□□□□□ -1.02
VAPB-205ENST00000476395 A0A088AWK7 358 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 CXorf49A8MYA2 514 aaPredicted RBP8.66□□□□□ -1.02
VAPB-205ENST00000476395 PEX1O43933 1283 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 ADCY3O60266 1144 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 TRPA1O75762 1119 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 TM7SF2O76062 418 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 CLPTM1O96005 669 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 ERBB2P04626 1255 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 SUPT20HL2P0C7V6 817 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 DPEP1P16444 411 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 ENTPD1P49961 510 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 CCNIQ14094 377 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 KCNJ11Q14654 390 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 SEPT7Q16181 437 aaKnown RBP8.66□□□□□ -1.02
VAPB-205ENST00000476395 SUPT20HL1Q3ZLR7 823 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 MTERF2Q49AM1 385 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 TMEM53Q6P2H8 277 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 OLFML1Q6UWY5 402 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 AMIGO2Q86SJ2 522 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 TMEM192Q8IY95 271 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 MCPH1Q8NEM0 835 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 CPXM1Q96SM3 734 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 SLC39A3Q9BRY0 314 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 MRPL1Q9BYD6 325 aaKnown RBP8.66□□□□□ -1.02
VAPB-205ENST00000476395 S100A14Q9HCY8 104 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 CISHQ9NSE2 258 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 RNF146Q9NTX7 359 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 E2F6O75461 281 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 STAMBPO95630 424 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 CYP3A5P20815 502 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 PROZP22891 400 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 KDELR1P24390 212 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 LIG4P49917 911 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 TEX44Q53QW1 395 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 GPAT2Q6NUI2 795 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 NPNTQ6UXI9 565 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 ZCCHC23Q6ZST2 131 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 BBS12Q6ZW61 710 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 ZNF534Q76KX8 674 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 POLNQ7Z5Q5 900 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 ARID3BQ8IVW6 561 aaPredicted RBP8.66□□□□□ -1.02
VAPB-205ENST00000476395 SMYD1Q8NB12 490 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 SLC43A3Q8NBI5 491 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 ABHD8Q96I13 439 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 NIFKQ9BYG3 293 aaKnown RBP8.66□□□□□ -1.02
VAPB-205ENST00000476395 PTPRHQ9HD43 1115 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 SLC9A2Q9UBY0 812 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 CLEC11AQ9Y240 323 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 TTLL3Q9Y4R7 772 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 TCRBV9S1A1TA0A576 114 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 A8MXQ7 604 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 SPTLC1O15269 473 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 IQCF3P0C7M6 154 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 RAG1P15918 1043 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 SERPINB6P35237 376 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 CD97P48960 835 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 MYBPC1Q00872 1141 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 SP4Q02446 784 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 DCTN2Q13561 401 aaKnown RBP8.66□□□□□ -1.02
VAPB-205ENST00000476395 HNRNPDQ14103 355 aaKnown RBP8.66□□□□□ -1.02
VAPB-205ENST00000476395 XYLT1Q86Y38 959 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 LSM14AQ8ND56 463 aaKnown RBP8.66□□□□□ -1.02
VAPB-205ENST00000476395 MMP19Q99542 508 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 SIX4Q9UIU6 781 aa8.66□□□□□ -1.02
VAPB-205ENST00000476395 RBMX2Q9Y388 322 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms