RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 MMRN2Q9H8L6 949 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 RAB20Q9NX57 234 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 WSB2Q9NYS7 404 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-228ENST00000476267 RASAL2Q9UJF2 1139 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 KCNJ18B7U540 433 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 TULP2O00295 520 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 NPC1O15118 1278 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 HYAL3O43820 417 aaPredicted RBP13.75□□□□□ -0.21
MRPL55-228ENST00000476267 OPHN1O60890 802 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 IGLV3-19P01714 112 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 MXI1P50539 228 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 COPAP53621 1224 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 ZC3H3Q8IXZ2 948 aaKnown RBP13.75□□□□□ -0.21
MRPL55-228ENST00000476267 TTC39CQ8N584 583 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 ANKRD52Q8NB46 1076 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 DNASE2BQ8WZ79 361 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 TATDN2Q93075 761 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 HEXIM2Q96MH2 286 aaKnown RBP13.75□□□□□ -0.21
MRPL55-228ENST00000476267 GTPBP2Q9BX10 602 aaKnown RBP13.75□□□□□ -0.21
MRPL55-228ENST00000476267 DCLK3Q9C098 648 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 ITM2CQ9NQX7 267 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 RALYQ9UKM9 306 aaKnown RBP13.75□□□□□ -0.21
MRPL55-228ENST00000476267 KLK13Q9UKR3 277 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 COQ4Q9Y3A0 265 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 NFE2L3Q9Y4A8 694 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 DMXL2Q8TDJ6 3036 aa13.75□□□□□ -0.21
MRPL55-228ENST00000476267 LAMA5O15230 3695 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 CAPNS1P04632 268 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 HMBSP08397 361 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 CD6P30203 668 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 YWHAGP61981 247 aaKnown RBP eCLIP13.74□□□□□ -0.21
MRPL55-228ENST00000476267 SIM1P81133 766 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-228ENST00000476267 EIF4HQ15056 248 aaKnown RBP13.74□□□□□ -0.21
MRPL55-228ENST00000476267 TRIP4Q15650 581 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-228ENST00000476267 CBWD6Q4V339 395 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 CBWD3Q5JTY5 395 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 CBWD5Q5RIA9 395 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 ANKS1BQ7Z6G8 1248 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 DENND1CQ8IV53 801 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 SMYD4Q8IYR2 804 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-228ENST00000476267 ARHGAP18Q8N392 663 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 UBR7Q8N806 425 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 CCDC150Q8NCX0 1101 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 FOXJ1Q92949 421 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 CCDC47Q96A33 483 aaKnown RBP13.74□□□□□ -0.21
MRPL55-228ENST00000476267 EEF2KMTQ96G04 330 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 PRDM16Q9HAZ2 1276 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 MARCH2Q9P0N8 246 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 STOML2Q9UJZ1 356 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 MSRB2Q9Y3D2 182 aa13.74□□□□□ -0.21
MRPL55-228ENST00000476267 ZBTB24O43167 697 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-228ENST00000476267 ZNF202O95125 648 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 SYPP08247 313 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 PRKCHP24723 683 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 MAOBP27338 520 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 TPMTP51580 245 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 TKTL1P51854 596 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 ATXN3P54252 364 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-228ENST00000476267 SLC14A1Q13336 389 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 ZNF234Q14588 700 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 COBLL1Q53SF7 1204 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 KIAA1324Q6UXG2 1013 aaKnown RBP13.73□□□□□ -0.21
MRPL55-228ENST00000476267 RAB44Q7Z6P3 723 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-228ENST00000476267 HDDC3Q8N4P3 179 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 CADM4Q8NFZ8 388 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 C1orf216Q8TAB5 229 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 PLD4Q96BZ4 506 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 TOE1Q96GM8 510 aaKnown RBP13.73□□□□□ -0.21
MRPL55-228ENST00000476267 SLC2A11Q9BYW1 496 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 ULBP1Q9BZM6 244 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 ELOVL2Q9NXB9 296 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 SUSD2Q9UGT4 822 aa13.73□□□□□ -0.21
MRPL55-228ENST00000476267 SLC12A8A0AV02 714 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 SRRM3A6NNA2 597 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-228ENST00000476267 H0Y626 953 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 XPO1O14980 1071 aaKnown RBP13.72□□□□□ -0.21
MRPL55-228ENST00000476267 NDUFS2O75306 463 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 TRIM16O95361 564 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 ZBED1O96006 694 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 NCAM1P13591 858 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 HOXD9P28356 352 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-228ENST00000476267 BNC1Q01954 994 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 PDE4CQ08493 712 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 GRIK2Q13002 908 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 STARD3Q14849 445 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 PLEKHG6Q3KR16 790 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 PKDCCQ504Y2 493 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 WDR45BQ5MNZ6 344 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 SYCP2LQ5T4T6 812 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 KIAA0907Q7Z7F0 614 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-228ENST00000476267 TMPRSS6Q8IU80 811 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 SCML4Q8N228 414 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 SORCS1Q8WY21 1168 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 NDRG1Q92597 394 aaKnown RBP13.72□□□□□ -0.21
MRPL55-228ENST00000476267 CAMK1GQ96NX5 476 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 DNAI2Q9GZS0 605 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 SCAND2PQ9GZW5 306 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-228ENST00000476267 TSPAN16Q9UKR8 245 aa13.72□□□□□ -0.21
MRPL55-228ENST00000476267 A0A1B0GTW7 788 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 YJEFN3A6XGL0 299 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms