RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 HMGB4Q8WW32 186 aa14.39□□□□□ -0.11
TMCO1-205ENST00000476143 ZNF606Q8WXB4 792 aa14.39□□□□□ -0.11
TMCO1-205ENST00000476143 SLC2A11Q9BYW1 496 aa14.39□□□□□ -0.11
TMCO1-205ENST00000476143 SEMA4GQ9NTN9 838 aa14.39□□□□□ -0.11
TMCO1-205ENST00000476143 LMBRD1Q9NUN5 540 aa14.39□□□□□ -0.11
TMCO1-205ENST00000476143 POLR3BQ9NW08 1133 aaPredicted RBP14.39□□□□□ -0.11
TMCO1-205ENST00000476143 SFMBT1Q9UHJ3 866 aa14.39□□□□□ -0.11
TMCO1-205ENST00000476143 KCNJ18B7U540 433 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 EPN2O95208 641 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 MBD3O95983 291 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 PENKP01210 267 aaPredicted RBP14.38□□□□□ -0.11
TMCO1-205ENST00000476143 KLKB1P03952 638 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 PON1P27169 355 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 KRT9P35527 623 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 GPD2P43304 727 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 TBX4P57082 545 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 RING1Q06587 406 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 KCNJ12Q14500 433 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 EIF4HQ15056 248 aaKnown RBP14.38□□□□□ -0.11
TMCO1-205ENST00000476143 AASDHQ4L235 1098 aaPredicted RBP14.38□□□□□ -0.11
TMCO1-205ENST00000476143 EMC10Q5UCC4 262 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 MSANTD2Q6P1R3 559 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 PHTF2Q8N3S3 785 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 MDGA1Q8NFP4 955 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 IPO4Q8TEX9 1081 aaKnown RBP14.38□□□□□ -0.11
TMCO1-205ENST00000476143 ZC3H10Q96K80 434 aaKnown RBP14.38□□□□□ -0.11
TMCO1-205ENST00000476143 IRX2Q9BZI1 471 aaPredicted RBP14.38□□□□□ -0.11
TMCO1-205ENST00000476143 ARRDC1-AS1Q9H2J1 176 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 SYNCQ9H7C4 482 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 DNAJC12Q9UKB3 198 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 SLC27A6Q9Y2P4 619 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 GVINP1Q7Z2Y8 2422 aa14.38□□□□□ -0.11
TMCO1-205ENST00000476143 EML5Q05BV3 1969 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 GFRA2O00451 464 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 IRAK2O43187 625 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 MSI1O43347 362 aaKnown RBP14.37□□□□□ -0.11
TMCO1-205ENST00000476143 TIMM44O43615 452 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 APOEP02649 317 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 DPP6P42658 865 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 RAPGEF1Q13905 1077 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 PLK5Q496M5 336 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 HSP90AA4PQ58FG1 418 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 FKBP15Q5T1M5 1219 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 ADGRF1Q5T601 910 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 FYB2Q5VWT5 728 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 GJB7Q6PEY0 223 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 TMEM92Q6UXU6 159 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 PRR23CQ6ZRP0 262 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 BHLHA9Q7RTU4 235 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 DGLUCYQ7Z3D6 616 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 IRF2BP1Q8IU81 584 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 SCUBE3Q8IX30 993 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 MSANTD4Q8NCY6 345 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 NETO1Q8TDF5 533 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 SHC3Q92529 594 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 TMA16Q96EY4 203 aaKnown RBP14.37□□□□□ -0.11
TMCO1-205ENST00000476143 ZSWIM1Q9BR11 485 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 ZDHHC4Q9NPG8 344 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 ANO10Q9NW15 660 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 NFE2L3Q9Y4A8 694 aa14.37□□□□□ -0.11
TMCO1-205ENST00000476143 MYO18AQ92614 2054 aaKnown RBP14.37□□□□□ -0.11
TMCO1-205ENST00000476143 TRIM24O15164 1050 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 SYNCRIPO60506 623 aaKnown RBP14.36□□□□□ -0.11
TMCO1-205ENST00000476143 ZNF217O75362 1048 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 CALCAP01258 141 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 WASP42768 502 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 CREB5Q02930 508 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 MESP2Q0VG99 397 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 PDCLQ13371 301 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 NNTQ13423 1086 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 RSPO4Q2I0M5 234 aaPredicted RBP14.36□□□□□ -0.11
TMCO1-205ENST00000476143 TCP11X2Q5H9J9 407 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 EGFLAMQ63HQ2 1017 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 DENND1BQ6P3S1 775 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 TOGARAM2Q6ZUX3 1019 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 BEND5Q7L4P6 421 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 LPCAT2Q7L5N7 544 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 SFTPA1Q8IWL2 248 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 FAM217AQ8IXS0 508 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 ENOX1Q8TC92 643 aaKnown RBP14.36□□□□□ -0.11
TMCO1-205ENST00000476143 WFIKKN2Q8TEU8 576 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 CIPCQ9C0C6 399 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 POPDC2Q9HBU9 364 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 VPS45Q9NRW7 570 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 SLC12A6Q9UHW9 1150 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 FBXO10Q9UK96 956 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 PCDHGC3Q9UN70 934 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 TLR6Q9Y2C9 796 aa14.36□□□□□ -0.11
TMCO1-205ENST00000476143 VPS13AQ96RL7 3174 aa14.35□□□□□ -0.11
TMCO1-205ENST00000476143 PRRT4C9JH25 899 aa14.35□□□□□ -0.11
TMCO1-205ENST00000476143 E5RJQ4 531 aa14.35□□□□□ -0.11
TMCO1-205ENST00000476143 TSPAN3O60637 253 aa14.35□□□□□ -0.11
TMCO1-205ENST00000476143 ADAM23O75077 832 aa14.35□□□□□ -0.11
TMCO1-205ENST00000476143 CISD3P0C7P0 127 aa14.35□□□□□ -0.11
TMCO1-205ENST00000476143 HNRNPLP14866 589 aaKnown RBP eCLIP14.35□□□□□ -0.11
TMCO1-205ENST00000476143 HOXC13P31276 330 aa14.35□□□□□ -0.11
TMCO1-205ENST00000476143 MPLP40238 635 aa14.35□□□□□ -0.11
TMCO1-205ENST00000476143 RPL34P49207 117 aaKnown RBP14.35□□□□□ -0.11
TMCO1-205ENST00000476143 DHPSP49366 369 aaPredicted RBP14.35□□□□□ -0.11
TMCO1-205ENST00000476143 YWHAZP63104 245 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms