RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 FYB2Q5VWT5 728 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 ANKS1BQ7Z6G8 1248 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 ZNF396Q96N95 335 aaPredicted RBP21.49■■□□□ 1.03
VPS36-203ENST00000475375 DCLK3Q9C098 648 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 ELOVL2Q9NXB9 296 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 SMG1Q96Q15 3661 aaKnown RBP21.49■■□□□ 1.03
VPS36-203ENST00000475375 A0A1B0GVT2 93 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 PVALEFA0A1B0GWK0 134 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 EPHX1P07099 455 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 PRKCHP24723 683 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 CORO1AP31146 461 aaKnown RBP21.48■■□□□ 1.03
VPS36-203ENST00000475375 CSNK1EP49674 416 aaKnown RBP21.48■■□□□ 1.03
VPS36-203ENST00000475375 PSEN1P49768 467 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 COG7P83436 770 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 BNC1Q01954 994 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 EFEMP1Q12805 493 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 SUZ12Q15022 739 aaKnown RBP21.48■■□□□ 1.03
VPS36-203ENST00000475375 ZACNQ401N2 412 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 CCDC157Q569K6 752 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 SERPINA13PQ6UXR4 307 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 SV2AQ7L0J3 742 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 TMPRSS7Q7RTY8 843 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 MARCH9Q86YJ5 346 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 SORCS1Q8WY21 1168 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 TWNKQ96RR1 684 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 CDK5RAP1Q96SZ6 601 aaKnown RBP21.48■■□□□ 1.03
VPS36-203ENST00000475375 NT5C1AQ9BXI3 368 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 PNPLA8Q9NP80 782 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 PLXNB3Q9ULL4 1909 aa21.48■■□□□ 1.03
VPS36-203ENST00000475375 ASS1P00966 412 aaKnown RBP21.47■■□□□ 1.03
VPS36-203ENST00000475375 HLA-DRAP01903 254 aa21.47■■□□□ 1.03
VPS36-203ENST00000475375 KIF11P52732 1056 aa21.47■■□□□ 1.03
VPS36-203ENST00000475375 CUL4BQ13620 913 aa21.47■■□□□ 1.03
VPS36-203ENST00000475375 ENPP2Q13822 863 aa21.47■■□□□ 1.03
VPS36-203ENST00000475375 CCDC186Q7Z3E2 898 aa21.47■■□□□ 1.03
VPS36-203ENST00000475375 SCD5Q86SK9 330 aa21.47■■□□□ 1.03
VPS36-203ENST00000475375 DENND1CQ8IV53 801 aa21.47■■□□□ 1.03
VPS36-203ENST00000475375 IMPG2Q9BZV3 1241 aa21.47■■□□□ 1.03
VPS36-203ENST00000475375 PCDHGB2Q9Y5G2 931 aa21.47■■□□□ 1.03
VPS36-203ENST00000475375 GCN1Q92616 2671 aaKnown RBP21.47■■□□□ 1.03
VPS36-203ENST00000475375 CD58P19256 250 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 AFF3P51826 1226 aaKnown RBP21.46■■□□□ 1.03
VPS36-203ENST00000475375 COPAP53621 1224 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 CYP4F3Q08477 520 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 EIF4HQ15056 248 aaKnown RBP21.46■■□□□ 1.03
VPS36-203ENST00000475375 CEP135Q66GS9 1140 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 RSRC2Q7L4I2 434 aaKnown RBP21.46■■□□□ 1.03
VPS36-203ENST00000475375 GRAMD1CQ8IYS0 662 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 GALNT15Q8N3T1 639 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 BAHD1Q8TBE0 780 aaPredicted RBP21.46■■□□□ 1.03
VPS36-203ENST00000475375 DDI1Q8WTU0 396 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 PIWIL1Q96J94 861 aaKnown RBP21.46■■□□□ 1.03
VPS36-203ENST00000475375 DNAI2Q9GZS0 605 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 EXOC1Q9NV70 894 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 DMAC2Q9NW81 257 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 TOR4AQ9NXH8 423 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 AGO1Q9UL18 857 aaKnown RBP21.46■■□□□ 1.03
VPS36-203ENST00000475375 STRIP2Q9ULQ0 834 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.46■■□□□ 1.03
VPS36-203ENST00000475375 BTBD3Q9Y2F9 522 aa21.46■■□□□ 1.03
VPS36-203ENST00000475375 YEATS4O95619 227 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 IGLV3-19P01714 112 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 INCA1Q0VD86 236 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 TEAD4Q15561 434 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 TMC2Q8TDI7 906 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 LHX5Q9H2C1 402 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 SCUBE2Q9NQ36 999 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 FAM13BQ9NYF5 915 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 CLIC5Q9NZA1 410 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 FRMD4BQ9Y2L6 1034 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 PTPRBP23467 1997 aa21.45■■□□□ 1.02
VPS36-203ENST00000475375 TRABD2BA6NFA1 517 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 NR3C1P04150 777 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 HLA-EP13747 358 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 KIF19Q2TAC6 998 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 FNDC3BQ53EP0 1204 aaKnown RBP21.44■■□□□ 1.02
VPS36-203ENST00000475375 SLC9A9Q8IVB4 645 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 INTS4Q96HW7 963 aaKnown RBP21.44■■□□□ 1.02
VPS36-203ENST00000475375 DUSP16Q9BY84 665 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 PCED1AQ9H1Q7 454 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 C6orf106Q9H6K1 298 aaPredicted RBP21.44■■□□□ 1.02
VPS36-203ENST00000475375 CYP3A43Q9HB55 503 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 MARCH2Q9P0N8 246 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 DKK4Q9UBT3 224 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 CLEC4EQ9ULY5 219 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 SNX11Q9Y5W9 270 aa21.44■■□□□ 1.02
VPS36-203ENST00000475375 URB1O60287 2271 aaKnown RBP21.43■■□□□ 1.02
VPS36-203ENST00000475375 SLC12A8A0AV02 714 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 FAM149AA5PLN7 773 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 IKBKBO14920 756 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 TIMM44O43615 452 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 STK4Q13043 487 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 FOXD4L6Q3SYB3 417 aaPredicted RBP21.43■■□□□ 1.02
VPS36-203ENST00000475375 ZNF394Q53GI3 561 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 PPP1R26Q5T8A7 1209 aaPredicted RBP21.43■■□□□ 1.02
VPS36-203ENST00000475375 FOXD4L3Q6VB84 417 aaPredicted RBP21.43■■□□□ 1.02
VPS36-203ENST00000475375 DBX2Q6ZNG2 339 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 CEP57L1Q8IYX8 460 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 ZNF276Q8N554 614 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 ENGASEQ8NFI3 743 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms