RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 OSGEPQ9NPF4 335 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 FAM49BQ9NUQ9 324 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 OSER1Q9NX31 292 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 TOR4AQ9NXH8 423 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 NAGPAQ9UK23 515 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 A0A087WV48 116 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 A0A1B0GVT2 93 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 A0A1W2PQH9 124 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 TRABD2BA6NFA1 517 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 LRRIQ3A6PVS8 624 aaPredicted RBP13.23□□□□□ -0.29
SKA3-206ENST00000475251 C4BPAP04003 597 aaKnown RBP13.23□□□□□ -0.29
SKA3-206ENST00000475251 EPHX1P07099 455 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 ADORA2BP29275 332 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 GRIA4P48058 902 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 NASPP49321 788 aaPredicted RBP13.23□□□□□ -0.29
SKA3-206ENST00000475251 CASP4P49662 377 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 PGFP49763 221 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 CCT8P50990 548 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 ZNF234Q14588 700 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 SERPINA13PQ6UXR4 307 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 CCDC186Q7Z3E2 898 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 OR2T3Q8NH03 318 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 C1orf216Q8TAB5 229 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 JAKMIP2Q96AA8 810 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 DHX58Q96C10 678 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 UBL7Q96S82 380 aaPredicted RBP13.23□□□□□ -0.29
SKA3-206ENST00000475251 IMPG2Q9BZV3 1241 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 CIPCQ9C0C6 399 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 FBRSQ9HAH7 460 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 ELOVL2Q9NXB9 296 aa13.23□□□□□ -0.29
SKA3-206ENST00000475251 LAMA5O15230 3695 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 PVALEFA0A1B0GWK0 134 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 GOLGA8CPA6NN73 597 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 HHLA1C9JL84 531 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 MDM4O15151 490 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 PCDHGA12O60330 932 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 DFNA5O60443 496 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 PPP6R2O75170 966 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 SYT1P21579 422 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 ABCG1P45844 678 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 CSNK1EP49674 416 aaKnown RBP13.22□□□□□ -0.29
SKA3-206ENST00000475251 COPAP53621 1224 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 BNC1Q01954 994 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 EHHADHQ08426 723 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 CYP4F3Q08477 520 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 CUL4AQ13619 759 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 SMAD1Q15797 465 aaKnown RBP13.22□□□□□ -0.29
SKA3-206ENST00000475251 ZACNQ401N2 412 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 GPRIN1Q7Z2K8 1008 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 ARHGAP18Q8N392 663 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 CPXM2Q8N436 756 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 C12orf29Q8N999 325 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 IGSF8Q969P0 613 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 CYFIP2Q96F07 1278 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 PIWIL1Q96J94 861 aaKnown RBP13.22□□□□□ -0.29
SKA3-206ENST00000475251 NT5C1AQ9BXI3 368 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 LHX5Q9H2C1 402 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 NMUR1Q9HB89 426 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 RASAL2Q9UJF2 1139 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 NUDT5Q9UKK9 219 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 STRIP2Q9ULQ0 834 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.22□□□□□ -0.29
SKA3-206ENST00000475251 LOC400499M0QZD8 3231 aa13.22□□□□□ -0.29
SKA3-206ENST00000475251 IKBKBO14920 756 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 SPTLC2O15270 562 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 VNN1O95497 513 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 ASS1P00966 412 aaKnown RBP13.21□□□□□ -0.29
SKA3-206ENST00000475251 C7P10643 843 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 CDK4P11802 303 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 PRKCHP24723 683 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 CORO1AP31146 461 aaKnown RBP13.21□□□□□ -0.29
SKA3-206ENST00000475251 ASPAP45381 313 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 KIF11P52732 1056 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 ZNF445P59923 1031 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 ZBTB16Q05516 673 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 PDE4CQ08493 712 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 INCA1Q0VD86 236 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 C19orf57Q0VDD7 668 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 KIF19Q2TAC6 998 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 ADAT2Q7Z6V5 191 aaKnown RBP13.21□□□□□ -0.29
SKA3-206ENST00000475251 FAM124AQ86V42 546 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 LINC00301Q8NCQ3 95 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 DDI1Q8WTU0 396 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 TMEM174Q8WUU8 243 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 BBC3Q96PG8 261 aaPredicted RBP13.21□□□□□ -0.29
SKA3-206ENST00000475251 BTBD1Q9H0C5 482 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 CYP3A43Q9HB55 503 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 SLC39A2Q9NP94 309 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 HMGXB4Q9UGU5 601 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 PLA2G4CQ9UP65 541 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 ANKRD6Q9Y2G4 727 aa13.21□□□□□ -0.29
SKA3-206ENST00000475251 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.21□□□□□ -0.29
SKA3-206ENST00000475251 ACACAQ13085 2346 aa13.21□□□□□ -0.3
SKA3-206ENST00000475251 CKAP5Q14008 2032 aa13.2□□□□□ -0.3
SKA3-206ENST00000475251 TK2O00142 265 aa13.2□□□□□ -0.3
SKA3-206ENST00000475251 KIF20AO95235 890 aa13.2□□□□□ -0.3
SKA3-206ENST00000475251 KLKB1P03952 638 aa13.2□□□□□ -0.3
SKA3-206ENST00000475251 HLA-EP13747 358 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms