RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
SRM-204ENST00000475189 CHKAP35790 457 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 EIF2DP41214 584 aaKnown RBP16.9■□□□□ 0.3
SRM-204ENST00000475189 MESP2Q0VG99 397 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 MTAPQ13126 283 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 NNTQ13423 1086 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 ANGPT1Q15389 498 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 CLEC16AQ2KHT3 1053 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 DCAF6Q58WW2 860 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 E4F1Q66K89 784 aaPredicted RBP16.9■□□□□ 0.3
SRM-204ENST00000475189 Q6ZS52 159 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 C1orf210Q8IVY1 113 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 CPXM2Q8N436 756 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 NAT16Q8N8M0 369 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 MSANTD4Q8NCY6 345 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 SLC30A5Q8TAD4 765 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 OLIG1Q8TAK6 271 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 SLC39A13Q96H72 371 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 NUP58Q9BVL2 599 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 BBS2Q9BXC9 721 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 SPATA6Q9NWH7 488 aaPredicted RBP16.9■□□□□ 0.3
SRM-204ENST00000475189 AIPL1Q9NZN9 384 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 WDR35Q9P2L0 1181 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 STOML2Q9UJZ1 356 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 TLR6Q9Y2C9 796 aa16.9■□□□□ 0.3
SRM-204ENST00000475189 NEDD8-MDP1E9PL57 170 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 IRAK2O43187 625 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 DAB1O75553 588 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 LATS1O95835 1130 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 TRUB2O95900 331 aaKnown RBP16.89■□□□□ 0.29
SRM-204ENST00000475189 TYRP14679 529 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 MMP8P22894 467 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 SCNN1AP37088 669 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 CDK17Q00537 523 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 CENPCQ03188 943 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 EIF4EBP2Q13542 120 aaPredicted RBP16.89■□□□□ 0.29
SRM-204ENST00000475189 SFMBT2Q5VUG0 894 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 NUGGCQ68CJ6 796 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 MAMSTRQ6ZN01 415 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 MMS22LQ6ZRQ5 1243 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 UNC45BQ8IWX7 931 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 MAML2Q8IZL2 1156 aaPredicted RBP16.89■□□□□ 0.29
SRM-204ENST00000475189 PHTF2Q8N3S3 785 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 PNKPQ96T60 521 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 SYT11Q9BT88 431 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 IER2Q9BTL4 223 aa16.89■□□□□ 0.29
SRM-204ENST00000475189 A0A0A0MRY4 1105 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 A0A1W2PQJ5 194 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 H0Y858 1186 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 GOLGA8SH3BPF8 625 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 K7EQS6 105 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 GFRA2O00451 464 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 CACNG3O60359 315 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 TULP3O75386 442 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 PENKP01210 267 aaPredicted RBP16.88■□□□□ 0.29
SRM-204ENST00000475189 NOS2P35228 1153 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 PTPN5P54829 565 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 PTP4A2Q12974 167 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 ASIC2Q16515 512 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 FBXO43Q4G163 708 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 ADGRF1Q5T601 910 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 FAM102AQ5T9C2 384 aaPredicted RBP16.88■□□□□ 0.29
SRM-204ENST00000475189 FYB2Q5VWT5 728 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 SPEM1Q8N4L4 309 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 AZIN2Q96A70 460 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 C11orf70Q9BRQ4 267 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 SEPT11Q9NVA2 429 aaKnown RBP16.88■□□□□ 0.29
SRM-204ENST00000475189 PLK2Q9NYY3 685 aa16.88■□□□□ 0.29
SRM-204ENST00000475189 FANCMQ8IYD8 2048 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.87■□□□□ 0.29
SRM-204ENST00000475189 TRIM24O15164 1050 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 CBFA2T2O43439 604 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 LAMTOR5O43504 91 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 ACSL4O60488 711 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 RNF40O75150 1001 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 KAT7O95251 611 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 APODP05090 189 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 TPM3P06753 285 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 TNFAIP3P21580 790 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 PRKCIP41743 596 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 MATKP42679 507 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 NSFP46459 744 aaKnown RBP16.87■□□□□ 0.29
SRM-204ENST00000475189 RNASE9P60153 205 aaKnown RBP16.87■□□□□ 0.29
SRM-204ENST00000475189 KDSRQ06136 332 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 FAM133BQ5BKY9 247 aaKnown RBP16.87■□□□□ 0.29
SRM-204ENST00000475189 ZC3H12AQ5D1E8 599 aaKnown RBP16.87■□□□□ 0.29
SRM-204ENST00000475189 PKN3Q6P5Z2 889 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 PHF13Q86YI8 300 aaPredicted RBP16.87■□□□□ 0.29
SRM-204ENST00000475189 SFTPA1Q8IWL2 248 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 CPLX3Q8WVH0 158 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 BHMTQ93088 406 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 IQCDQ96DY2 449 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 XPO6Q96QU8 1125 aaKnown RBP16.87■□□□□ 0.29
SRM-204ENST00000475189 ADAM33Q9BZ11 813 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 HAUS4Q9H6D7 363 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 ARHGEF4Q9NR80 690 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 DNAJC17Q9NVM6 304 aaKnown RBP16.87■□□□□ 0.29
SRM-204ENST00000475189 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.87■□□□□ 0.29
SRM-204ENST00000475189 DEC1Q9P2X7 70 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 TMEM59LQ9UK28 342 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms