RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 TAS2R14Q9NYV8 317 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 CA14Q9ULX7 337 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 SSU72P8A0A1W2PR75 194 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 SIGLEC16A6NMB1 481 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 KCNU1A8MYU2 1149 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 TRDMT1O14717 391 aaKnown RBP17.64■□□□□ 0.41
SCAF11-206ENST00000474828 CAPN9O14815 690 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 MSI1O43347 362 aaKnown RBP17.64■□□□□ 0.41
SCAF11-206ENST00000474828 RTN2O75298 545 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 PDGFBP01127 241 aaPredicted RBP17.64■□□□□ 0.41
SCAF11-206ENST00000474828 PLEKP08567 350 aaPredicted RBP17.64■□□□□ 0.41
SCAF11-206ENST00000474828 CORO1AP31146 461 aaKnown RBP17.64■□□□□ 0.41
SCAF11-206ENST00000474828 FLT3P36888 993 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 EIF2DP41214 584 aaKnown RBP17.64■□□□□ 0.41
SCAF11-206ENST00000474828 SLC25A52Q3SY17 297 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 DCAF6Q58WW2 860 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 FAM102AQ5T9C2 384 aaPredicted RBP17.64■□□□□ 0.41
SCAF11-206ENST00000474828 NUGGCQ68CJ6 796 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 PLEKHA7Q6IQ23 1121 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 TXNDC11Q6PKC3 985 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 CNGA4Q8IV77 575 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 UNC45BQ8IWX7 931 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 ETFBKMTQ8IXQ9 262 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 FBXL6Q8N531 539 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 CLDN23Q96B33 292 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 C11orf70Q9BRQ4 267 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 SPHK2Q9NRA0 654 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.64■□□□□ 0.41
SCAF11-206ENST00000474828 DLGAP2Q9P1A6 1054 aa17.64■□□□□ 0.41
SCAF11-206ENST00000474828 A0A0A0MRY4 1105 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 C2CD4BA6NLJ0 364 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 IRF1P10914 325 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 AOC1P19801 751 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 FECHP22830 423 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 CDC25BP30305 580 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 CHKAP35790 457 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 PTPN9P43378 593 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 HARS2P49590 506 aaKnown RBP17.63■□□□□ 0.41
SCAF11-206ENST00000474828 CXCR3P49682 368 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 TBX4P57082 545 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 AMPD2Q01433 879 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 NR1H3Q13133 447 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 MTA1Q13330 715 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 PPP2R5DQ14738 602 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 ZNF852Q6ZMS4 543 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 TPRG1Q6ZUI0 275 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 TC2NQ8N9U0 490 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 CENPIQ92674 756 aaPredicted RBP17.63■□□□□ 0.41
SCAF11-206ENST00000474828 PBXIP1Q96AQ6 731 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 P2RY11Q96G91 374 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 TBC1D17Q9HA65 648 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 LTB4R2Q9NPC1 389 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.63■□□□□ 0.41
SCAF11-206ENST00000474828 CALCOCO1Q9P1Z2 691 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 ADAMTS1Q9UHI8 967 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 FBXO10Q9UK96 956 aa17.63■□□□□ 0.41
SCAF11-206ENST00000474828 F5P12259 2224 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 A0A087X0T9 212 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 AKR1B15C9JRZ8 316 aaPredicted RBP17.62■□□□□ 0.41
SCAF11-206ENST00000474828 GRAP2O75791 330 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 ADH1CP00326 375 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 PENKP01210 267 aaPredicted RBP17.62■□□□□ 0.41
SCAF11-206ENST00000474828 FTLP02792 175 aaPredicted RBP17.62■□□□□ 0.41
SCAF11-206ENST00000474828 FAM228BP0C875 321 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 OPRD1P41143 372 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 TMEM196Q5HYL7 178 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 LY6G5CQ5SRR4 150 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 ADGRF1Q5T601 910 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 ASTLQ6HA08 431 aaPredicted RBP17.62■□□□□ 0.41
SCAF11-206ENST00000474828 MAMSTRQ6ZN01 415 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 TMC6Q7Z403 805 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 TMEM25Q86YD3 366 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 PHTF2Q8N3S3 785 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 PJA1Q8NG27 643 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 STAP1Q9ULZ2 295 aa17.62■□□□□ 0.41
SCAF11-206ENST00000474828 MRPS17Q9Y2R5 130 aaKnown RBP17.62■□□□□ 0.41
SCAF11-206ENST00000474828 CACNG3O60359 315 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 F9P00740 461 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 TPM1P09493 284 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 MYBL1P10243 752 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 SLC2A3P11169 496 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 KRT3P12035 628 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 RRM1P23921 792 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 TARSP26639 723 aaKnown RBP17.61■□□□□ 0.41
SCAF11-206ENST00000474828 GBP1P32455 592 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 RFC1P35251 1148 aaPredicted RBP17.61■□□□□ 0.41
SCAF11-206ENST00000474828 RPS9P46781 194 aaKnown RBP17.61■□□□□ 0.41
SCAF11-206ENST00000474828 SOX9P48436 509 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 NUBP1P53384 320 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 ADKP55263 362 aaKnown RBP17.61■□□□□ 0.41
SCAF11-206ENST00000474828 GAD2Q05329 585 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 CCINQ13939 588 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 TDRD12Q587J7 1177 aaKnown RBP17.61■□□□□ 0.41
SCAF11-206ENST00000474828 FAM133BQ5BKY9 247 aaKnown RBP17.61■□□□□ 0.41
SCAF11-206ENST00000474828 FYB2Q5VWT5 728 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 VPS36Q86VN1 386 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 DENND1CQ8IV53 801 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 CCDC105Q8IYK2 499 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 FAM3CQ92520 227 aa17.61■□□□□ 0.41
SCAF11-206ENST00000474828 METTL5Q9NRN9 209 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms