RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PNPLA8Q9NP80 782 aa14.7□□□□□ -0.06
CCDC78-209ENST00000474647 DMAC2Q9NW81 257 aa14.7□□□□□ -0.06
CCDC78-209ENST00000474647 THAP10Q9P2Z0 257 aaPredicted RBP14.7□□□□□ -0.06
CCDC78-209ENST00000474647 SERTAD1Q9UHV2 236 aa14.7□□□□□ -0.06
CCDC78-209ENST00000474647 PCDHA7Q9UN72 937 aa14.7□□□□□ -0.06
CCDC78-209ENST00000474647 ZNF510Q9Y2H8 683 aa14.7□□□□□ -0.06
CCDC78-209ENST00000474647 FRMD4BQ9Y2L6 1034 aa14.7□□□□□ -0.06
CCDC78-209ENST00000474647 KLRC4O43908 158 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 KLKB1P03952 638 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 CYBBP04839 570 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 TRIM49P0CI25 452 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 TRIM49CP0CI26 452 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 CHKAP35790 457 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 MATKP42679 507 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 KIF11P52732 1056 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 ARID5AQ03989 594 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 ZNF234Q14588 700 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 KMT5BQ4FZB7 885 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 ZNF394Q53GI3 561 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 RESP18Q5W5W9 173 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 CCDC186Q7Z3E2 898 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 SCD5Q86SK9 330 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 TMPRSS6Q8IU80 811 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 DENND1CQ8IV53 801 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 SLC9A9Q8IVB4 645 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 MDM1Q8TC05 714 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 TMC2Q8TDI7 906 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 CDK5RAP1Q96SZ6 601 aaKnown RBP14.69□□□□□ -0.06
CCDC78-209ENST00000474647 KCTD10Q9H3F6 313 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 CCDC86Q9H6F5 360 aaKnown RBP14.69□□□□□ -0.06
CCDC78-209ENST00000474647 TM7SF3Q9NS93 570 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 EIF2B4Q9UI10 523 aaKnown RBP14.69□□□□□ -0.06
CCDC78-209ENST00000474647 FBXO10Q9UK96 956 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 PCOLCE2Q9UKZ9 415 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 SLC27A6Q9Y2P4 619 aa14.69□□□□□ -0.06
CCDC78-209ENST00000474647 GCN1Q92616 2671 aaKnown RBP14.69□□□□□ -0.06
CCDC78-209ENST00000474647 APC2O95996 2303 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 GOLGA8CPA6NN73 597 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 NPC1O15118 1278 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 BCAT2O15382 392 aaPredicted RBP14.68□□□□□ -0.06
CCDC78-209ENST00000474647 PENKP01210 267 aaPredicted RBP14.68□□□□□ -0.06
CCDC78-209ENST00000474647 EPHX1P07099 455 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 PRKCHP24723 683 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 OXTRP30559 389 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 ANP32AP39687 249 aaKnown RBP14.68□□□□□ -0.06
CCDC78-209ENST00000474647 VAMP7P51809 220 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 COG7P83436 770 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 PPP1R26Q5T8A7 1209 aaPredicted RBP14.68□□□□□ -0.06
CCDC78-209ENST00000474647 SERPINA13PQ6UXR4 307 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 RSRC2Q7L4I2 434 aaKnown RBP14.68□□□□□ -0.06
CCDC78-209ENST00000474647 METTL3Q86U44 580 aaKnown RBP14.68□□□□□ -0.06
CCDC78-209ENST00000474647 SLCO6A1Q86UG4 719 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 CADM4Q8NFZ8 388 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 DDI1Q8WTU0 396 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 SORCS1Q8WY21 1168 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 DNASE2BQ8WZ79 361 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 DCLK3Q9C098 648 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 DNAI2Q9GZS0 605 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 NIF3L1Q9GZT8 377 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 APOBEC3GQ9HC16 384 aaKnown RBP14.68□□□□□ -0.06
CCDC78-209ENST00000474647 ITM2CQ9NQX7 267 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 FNDC3AQ9Y2H6 1198 aaKnown RBP14.68□□□□□ -0.06
CCDC78-209ENST00000474647 GPSM3Q9Y4H4 160 aa14.68□□□□□ -0.06
CCDC78-209ENST00000474647 PDXKO00764 312 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 IKBKBO14920 756 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 CALUO43852 315 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-209ENST00000474647 CBFA2T3O75081 653 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 CILPO75339 1184 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 CAPNS1P04632 268 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 GCLMP48507 274 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 ZNF132P52740 706 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 COPAP53621 1224 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 COL28A1Q2UY09 1125 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 HLA-BQ31612 363 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 C1orf220Q5T0J3 134 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 CCNI2Q6ZMN8 369 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-209ENST00000474647 CCDC150Q8NCX0 1101 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 TAS1R2Q8TE23 839 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 PAGE5Q96GU1 130 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 NUP58Q9BVL2 599 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 DUSP16Q9BY84 665 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 CYP3A43Q9HB55 503 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 CLIC5Q9NZA1 410 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 MARCH2Q9P0N8 246 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 AGO1Q9UL18 857 aaKnown RBP14.67□□□□□ -0.06
CCDC78-209ENST00000474647 STRIP2Q9ULQ0 834 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 CLEC4EQ9ULY5 219 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 NFE2L3Q9Y4A8 694 aa14.67□□□□□ -0.06
CCDC78-209ENST00000474647 SMG1Q96Q15 3661 aaKnown RBP14.66□□□□□ -0.06
CCDC78-209ENST00000474647 DOCK9Q9BZ29 2069 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 A0A1B0GVT2 93 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 SLC12A8A0AV02 714 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 METTL12A8MUP2 240 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 ACTN4O43707 911 aaKnown RBP14.66□□□□□ -0.06
CCDC78-209ENST00000474647 SLFN14P0C7P3 912 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 PDIA4P13667 645 aaKnown RBP14.66□□□□□ -0.06
CCDC78-209ENST00000474647 HLA-EP13747 358 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 NR2F2P24468 414 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 ENPP2Q13822 863 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 BECN1Q14457 450 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms