RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 OGFRQ9NZT2 677 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 PCSK1NQ9UHG2 260 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ADAM28Q9UKQ2 775 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 FAM32AQ9Y421 112 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 AKAP12Q02952 1782 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 EVPLLA8MZ36 301 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 KCNN4O15554 427 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 DAB1O75553 588 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 PALMO75781 387 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 KCNA2P16389 499 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 AMD1P17707 334 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CLCN1P35523 988 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 TM4SF4P48230 202 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SLC6A3Q01959 620 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 GUCY2DQ02846 1103 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 RFTN1Q14699 578 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 USP39Q53GS9 565 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ERMARDQ5T6L9 678 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 LRRC38Q5VT99 294 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 KLHDC7AQ5VTJ3 777 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CLEC17AQ6ZS10 378 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 BBS7Q8IWZ6 715 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 BRSK1Q8TDC3 778 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF514Q96K75 400 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ZFP42Q96MM3 310 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 STRADBQ9C0K7 418 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 OSBPL2Q9H1P3 480 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CARD9Q9H257 536 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 PDE11AQ9HCR9 933 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 WDR6Q9NNW5 1121 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 KBTBD4Q9NVX7 518 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 FBXL5Q9UKA1 691 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CDV3Q9UKY7 258 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 EDARQ9UNE0 448 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 FAF1Q9UNN5 650 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 COG5Q9UP83 839 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ANKRD6Q9Y2G4 727 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ARIH1Q9Y4X5 557 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CASTOR2A6NHX0 329 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 TXNDC9O14530 226 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 XPO1O14980 1071 aaKnown RBP4.75□□□□□ -1.65
CCNL1-215ENST00000474539 MED24O75448 989 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 PSMD10O75832 226 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 SGPL1O95470 568 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 SEC24BO95487 1268 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 PGK1P00558 417 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 KRT6AP02538 564 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 KRT6BP04259 564 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 CYP1A1P04798 512 aaPredicted RBP4.75□□□□□ -1.65
CCNL1-215ENST00000474539 SYPP08247 313 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 TRIM49P0CI25 452 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 TRIM49CP0CI26 452 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 SNHG28P0DPA3 235 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 PTPN9P43378 593 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 RPL21P46778 160 aaKnown RBP4.75□□□□□ -1.65
CCNL1-215ENST00000474539 CAPZA2P47755 286 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 KRT6CP48668 564 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 MAPKAPK2P49137 400 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 VPS41P49754 854 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 CCL23P55773 120 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 ANTXR2P58335 489 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 PRKCZQ05513 592 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 STX5Q13190 355 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 DGKKQ5KSL6 1271 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 CENPPQ6IPU0 288 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 ESRP1Q6NXG1 681 aaKnown RBP4.75□□□□□ -1.65
CCNL1-215ENST00000474539 CYP4Z1Q86W10 505 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 TRIM59Q8IWR1 403 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 CELF5Q8N6W0 485 aaKnown RBP4.75□□□□□ -1.65
CCNL1-215ENST00000474539 ANKRD52Q8NB46 1076 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 TOX2Q96NM4 488 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 C17orf62Q9BQA9 187 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 CORO1BQ9BR76 489 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 FAIM2Q9BWQ8 316 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 ZYG11BQ9C0D3 744 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 AASDHPPTQ9NRN7 309 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 WWOXQ9NZC7 414 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 NCDNQ9UBB6 729 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 COLEC10Q9Y6Z7 277 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 MEIS2O14770 477 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 RAD51BO15315 384 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 B4GALT4O60513 344 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 ARIH2O95376 493 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 HPGDP15428 266 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 FSHRP23945 695 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 GTF2E2P29084 291 aaKnown RBP4.75□□□□□ -1.65
CCNL1-215ENST00000474539 PPP2R1BP30154 601 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 SCNN1GP51170 649 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 PLTPP55058 493 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 RGS1Q08116 209 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 CDH17Q12864 832 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 SF3B4Q15427 424 aaKnown RBP eCLIP4.75□□□□□ -1.651e-9■■■■■ 40.4
CCNL1-215ENST00000474539 DPCR1Q3MIW9 517 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 PARP15Q460N3 678 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 SLC36A4Q6YBV0 504 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 PAGE2Q7Z2X7 111 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 PASD1Q8IV76 773 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 SYTL1Q8IYJ3 562 aa4.75□□□□□ -1.65
CCNL1-215ENST00000474539 SAMD14Q8IZD0 417 aaPredicted RBP4.75□□□□□ -1.65
CCNL1-215ENST00000474539 TSTD1Q8NFU3 115 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms