RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 GRXCR2A6NFK2 248 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 PRAMEF12O95522 483 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 FTCDO95954 541 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 IGLV3-27P01718 113 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 HMBSP08397 361 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 IRF1P10914 325 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 TCF4P15884 667 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 MIPP30301 263 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 PCK1P35558 622 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 GJC1P36383 396 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLC1A1P43005 524 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 CXCR3P49682 368 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 KPNA1P52294 538 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 TAS2R40P59535 323 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 COG7P83436 770 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 EIF4EBP2Q13542 120 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 ZNF569Q5MCW4 686 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 SCYL2Q6P3W7 929 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 PEX26Q7Z412 305 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLFN11Q7Z7L1 901 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 MAFAQ8NHW3 353 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 SUSD6Q92537 303 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 FGF13Q92913 245 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 HLA-CQ95604 372 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 RNF34Q969K3 372 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 PLD4Q96BZ4 506 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLC39A13Q96H72 371 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 ZFRQ96KR1 1074 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 ZSWIM3Q96MP5 696 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 PEBP4Q96S96 227 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 KLF16Q9BXK1 252 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 SMG9Q9H0W8 520 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 PCSK1NQ9UHG2 260 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 ARHGAP26Q9UNA1 814 aa13.05□□□□□ -0.32
TRAPPC12-217ENST00000473348 MBTPS2O43462 519 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 PRPSAP2O60256 369 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 APOEP02649 317 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 TNNT1P13805 278 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 CCR1P32246 355 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 KCNQ1P51787 676 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLC25A11Q02978 314 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 RING1Q06587 406 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 PPP2R5DQ14738 602 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 ZC3H12AQ5D1E8 599 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 BRMS1LQ5PSV4 323 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 POTEHQ6S545 545 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 NT5DC3Q86UY8 548 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLC35F6Q8N357 371 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 CCDC185Q8N715 623 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 ZSCAN18Q8TBC5 510 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 MYADMQ96S97 322 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 ZWILCHQ9H900 591 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 GKN1Q9NS71 199 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 TMEM51Q9NW97 253 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 GDE1Q9NZC3 331 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 AMFRQ9UKV5 643 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 CDH7Q9ULB5 785 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 USP18Q9UMW8 372 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 KIAA1549LQ6ZVL6 1849 aa13.04□□□□□ -0.32
TRAPPC12-217ENST00000473348 SHROOM3Q8TF72 1996 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 COL4A3Q01955 1670 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 C5orf42Q9H799 3197 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 STC2O76061 302 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 MOCS2O96007 188 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLC2A3P11169 496 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 IL1R2P27930 398 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 WEE1P30291 646 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 GBP2P32456 591 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 GNG11P61952 73 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 ZXDBP98169 803 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 SMTNL2Q2TAL5 461 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 FAM78AQ5JUQ0 283 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 NUGGCQ68CJ6 796 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 TXNRD3NBQ6F5E7 133 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 CYP4V2Q6ZWL3 525 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 DDX42Q86XP3 938 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 ARID3BQ8IVW6 561 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 RHOT1Q8IXI2 618 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 TTC16Q8NEE8 873 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 ADAMTS19Q8TE59 1207 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 USP13Q92995 863 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 WBP2Q969T9 261 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 NTAN1Q96AB6 310 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 C16orf45Q96MC5 204 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 ASB16Q96NS5 453 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 SNRNP25Q9BV90 132 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 TKTL2Q9H0I9 626 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 WDCPQ9H6R7 721 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.03□□□□□ -0.324e-7■■■■□ 24.4
TRAPPC12-217ENST00000473348 ARHGEF38Q9NXL2 777 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 CFAP97Q9P2B7 532 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 PACSIN2Q9UNF0 486 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 AP4E1Q9UPM8 1137 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 CCL26Q9Y258 94 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 CHD5Q8TDI0 1954 aa13.03□□□□□ -0.32
TRAPPC12-217ENST00000473348 TCF20Q9UGU0 1960 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms