RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SHBQ15464 509 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 KNOP1Q1ED39 458 aaKnown RBP10.11□□□□□ -0.79
MCF2L-223ENST00000473345 WDR45BQ5MNZ6 344 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 C10orf120Q5SQS8 335 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 PRAMEF14Q5SWL7 426 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 SV2AQ7L0J3 742 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 RABEPKQ7Z6M1 372 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 CADM4Q8NFZ8 388 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 CYB5D2Q8WUJ1 264 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 SIPA1Q96FS4 1042 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 HNRNPABQ99729 332 aaKnown RBP10.11□□□□□ -0.79
MCF2L-223ENST00000473345 NACA2Q9H009 215 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 SCUBE2Q9NQ36 999 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 DKK4Q9UBT3 224 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 SUSD2Q9UGT4 822 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 APOBEC2Q9Y235 224 aaKnown RBP10.11□□□□□ -0.79
MCF2L-223ENST00000473345 NFE2L3Q9Y4A8 694 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 USP3Q9Y6I4 520 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 CKAP5Q14008 2032 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 ATP8B3O60423 1300 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 A0A087WV48 116 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 C10orf142B7Z368 130 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 TLX3O43711 291 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-223ENST00000473345 EXOC3O60645 756 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 GABBR2O75899 941 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 HLA-DRAP01903 254 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 WNT1P04628 370 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 FAM200BP0CF97 657 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 GNSP15586 552 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 HOXD9P28356 352 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-223ENST00000473345 HLA-FP30511 346 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 CORO1AP31146 461 aaKnown RBP10.1□□□□□ -0.79
MCF2L-223ENST00000473345 MATKP42679 507 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 AFMP43652 599 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 PLA2G4AP47712 749 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 PPP3CAQ08209 521 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 EFEMP1Q12805 493 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 SYCP2LQ5T4T6 812 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 PPP1R26Q5T8A7 1209 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-223ENST00000473345 SDE2Q6IQ49 451 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 KLHDC10Q6PID8 442 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 DHRS13Q6UX07 377 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 DENND1CQ8IV53 801 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 FAM217AQ8IXS0 508 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 TAS1R2Q8TE23 839 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 RHBDD1Q8TEB9 315 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 MYEOVQ96EZ4 313 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 CYFIP2Q96F07 1278 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 TNIP3Q96KP6 325 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 ZDHHC5Q9C0B5 715 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 TMEM245Q9H330 911 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 FBXO44Q9H4M3 255 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 TM9SF3Q9HD45 589 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 ELOVL2Q9NXB9 296 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 SERGEFQ9UGK8 458 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 RASAL2Q9UJF2 1139 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 DNMT3LQ9UJW3 386 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 NAGPAQ9UK23 515 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-223ENST00000473345 RAI2Q9Y5P3 530 aa10.1□□□□□ -0.79
MCF2L-223ENST00000473345 UBE4BO95155 1302 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 SPTLC2O15270 562 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 POLR2DO15514 142 aaKnown RBP10.09□□□□□ -0.79
MCF2L-223ENST00000473345 TSPAN3O60637 253 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 IGHV4-34P06331 123 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 TRIM49P0CI25 452 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 TRIM49CP0CI26 452 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 ANP32AP39687 249 aaKnown RBP10.09□□□□□ -0.79
MCF2L-223ENST00000473345 CAMK2GQ13555 558 aaPredicted RBP10.09□□□□□ -0.79
MCF2L-223ENST00000473345 SMAD1Q15797 465 aaKnown RBP10.09□□□□□ -0.79
MCF2L-223ENST00000473345 CCDC157Q569K6 752 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 FOXD4L5Q5VV16 416 aaPredicted RBP10.09□□□□□ -0.79
MCF2L-223ENST00000473345 PCSK4Q6UW60 755 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 STXBP4Q6ZWJ1 553 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 CCDC186Q7Z3E2 898 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 ADIPOR2Q86V24 386 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 GATAD2AQ86YP4 633 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 FOXD4L4Q8WXT5 416 aaPredicted RBP10.09□□□□□ -0.79
MCF2L-223ENST00000473345 SEMA4DQ92854 862 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 BIRC7Q96CA5 298 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 MYO19Q96H55 970 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 ARID3AQ99856 593 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 LSM7Q9UK45 103 aaKnown RBP10.09□□□□□ -0.79
MCF2L-223ENST00000473345 ANKRD6Q9Y2G4 727 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 PCDHGB2Q9Y5G2 931 aa10.09□□□□□ -0.79
MCF2L-223ENST00000473345 PLK4O00444 970 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 FLRT2O43155 660 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 CER1O95813 267 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 EPHX1P07099 455 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 CD58P19256 250 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 RDXP35241 583 aaKnown RBP10.08□□□□□ -0.8
MCF2L-223ENST00000473345 CTSKP43235 329 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 RPS14P62263 151 aaKnown RBP10.08□□□□□ -0.8
MCF2L-223ENST00000473345 DNAJC3Q13217 504 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 STK38Q15208 465 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 SGSM1Q2NKQ1 1148 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 FOXD4L6Q3SYB3 417 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-223ENST00000473345 PREPLQ4J6C6 727 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-223ENST00000473345 ZNF394Q53GI3 561 aa10.08□□□□□ -0.8
MCF2L-223ENST00000473345 FOXD4L3Q6VB84 417 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms