RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PDE6AP16499 860 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 NFKBIAP25963 317 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 PGM1P36871 562 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 EPS15P42566 896 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 LMAN1P49257 510 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 HDAC4P56524 1084 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 C1QTNF8P60827 252 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 GMFBP60983 142 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 PRKCQQ04759 706 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 RUNX1T1Q06455 604 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 GABPB1Q06547 395 aaPredicted RBP6.3□□□□□ -1.4
RTF1-203ENST00000473214 CDK5R2Q13319 367 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 SPIDRQ14159 915 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 IFI16Q16666 785 aaKnown RBP6.3□□□□□ -1.4
RTF1-203ENST00000473214 GLRA4Q5JXX5 417 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 MPP7Q5T2T1 576 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 FSTL4Q6MZW2 842 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 RNF44Q7L0R7 432 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 MIGA2Q7L4E1 593 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 OTOAQ7RTW8 1153 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 KRT27Q7Z3Y8 459 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 MON1AQ86VX9 555 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 FAM181AQ8N9Y4 354 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 MFSD2AQ8NA29 543 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 SPERTQ8NA61 448 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 POGLUT1Q8NBL1 392 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 CCDC150Q8NCX0 1101 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 NPLOC4Q8TAT6 608 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 SETD6Q8TBK2 473 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 CCDC110Q8TBZ0 833 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 METTL6Q8TCB7 284 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 AGR3Q8TD06 166 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 TSPEARQ8WU66 669 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 SCFD2Q8WU76 684 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 NCSTNQ92542 709 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 DPF2Q92785 391 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 SDCCAG3Q96C92 435 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 SLC38A3Q99624 504 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 GDF15Q99988 308 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 FAM118BQ9BPY3 351 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 LBHD1Q9BQE6 289 aaPredicted RBP6.3□□□□□ -1.4
RTF1-203ENST00000473214 PACSIN1Q9BY11 444 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 NACAP1Q9BZK3 213 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 TRIM7Q9C029 511 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 KLHL4Q9C0H6 718 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 STMN4Q9H169 189 aaPredicted RBP6.3□□□□□ -1.4
RTF1-203ENST00000473214 SLC25A18Q9H1K4 315 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 MUC13Q9H3R2 512 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 CHODLQ9H9P2 273 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 PRDM8Q9NQV8 689 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 PSD3Q9NYI0 1048 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 UBAP1Q9NZ09 502 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 RGL1Q9NZL6 768 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 CRIM1Q9NZV1 1036 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 ATP11BQ9Y2G3 1177 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 SF3B6Q9Y3B4 125 aaKnown RBP6.3□□□□□ -1.4
RTF1-203ENST00000473214 U3KQE9 123 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 NSD2O96028 1365 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 KANK1Q14678 1352 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 E9PCH4 1651 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 RREB1Q92766 1687 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 MYPNQ86TC9 1320 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 PTPN23Q9H3S7 1636 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 LRRD1A4D1F6 860 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 H0YCG3 227 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 H7BY64 318 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 HNRNPRO43390 633 aaKnown RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 MYO1BO43795 1136 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 CSPG5O95196 566 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 GCNT3O95395 438 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 MT-ND5P03915 603 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 ANXA1P04083 346 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 CNPP09543 421 aaKnown RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 MYBL1P10243 752 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 PRG2P13727 222 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 TYMPP19971 482 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 CCNA2P20248 432 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 ADSSP30520 456 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 MCM7P33993 719 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 GRK3P35626 688 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 HSD17B2P37059 387 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 RABIFP47224 123 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 CPA2P48052 419 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 PIP4K2AP48426 406 aaPredicted RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 CAMLGP49069 296 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 DIO1P49895 249 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 HK3P52790 923 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 MLLT6P55198 1093 aaPredicted RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 JAM2P57087 298 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 MYO1EQ12965 1108 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 TRDNQ13061 729 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 LAPTM5Q13571 262 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 TNFAIP1Q13829 316 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 XKR9Q5GH70 373 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 ADALQ6DHV7 355 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 KRT80Q6KB66 452 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 PPP1R21Q6ZMI0 780 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 FAM83HQ6ZRV2 1179 aaPredicted RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 INTS8Q75QN2 995 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms