RNA–Protein interactions for RNA: ENST00000473195.5

TRAIP-203, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-203ENST00000473195 CLEC4CQ8WTT0 213 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 NELFBQ8WX92 580 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 FAXDC2Q96IV6 333 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 SPACA7Q96KW9 195 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 ZSWIM1Q9BR11 485 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 LRRC4Q9HBW1 653 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 CD248Q9HCU0 757 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 MARCH2Q9P0N8 246 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 STARD13Q9Y3M8 1113 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 PCDHB4Q9Y5E5 795 aa12.68□□□□□ -0.38
TRAIP-203ENST00000473195 O00370 1275 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 GIPC1O14908 333 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 KHNYNO15037 678 aaKnown RBP12.67□□□□□ -0.38
TRAIP-203ENST00000473195 MSI1O43347 362 aaKnown RBP12.67□□□□□ -0.38
TRAIP-203ENST00000473195 TSPAN3O60637 253 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 LETM1O95202 739 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-203ENST00000473195 VDRP11473 427 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 ITPKAP23677 461 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 BRD2P25440 801 aaKnown RBP12.67□□□□□ -0.38
TRAIP-203ENST00000473195 COG7P83436 770 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 MORC3Q14149 939 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 PREPLQ4J6C6 727 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-203ENST00000473195 PM20D1Q6GTS8 502 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 NUDT18Q6ZVK8 323 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 LPCAT2Q7L5N7 544 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 TRMT11Q7Z4G4 463 aaKnown RBP12.67□□□□□ -0.38
TRAIP-203ENST00000473195 FMNL3Q8IVF7 1028 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 ZNF276Q8N554 614 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 SORCS1Q8WY21 1168 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 DHTKD1Q96HY7 919 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-203ENST00000473195 NT5C1BQ96P26 610 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 ANP32EQ9BTT0 268 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 UBXN6Q9BZV1 441 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 NUP62CLQ9H1M0 184 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 HESX1Q9UBX0 185 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 FBXO10Q9UK96 956 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 CYP8B1Q9UNU6 501 aa12.67□□□□□ -0.38
TRAIP-203ENST00000473195 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
TRAIP-203ENST00000473195 IGHV1OR15-9A0A0B4J2B8 117 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 CDX4O14627 284 aaPredicted RBP12.66□□□□□ -0.38
TRAIP-203ENST00000473195 PENKP01210 267 aaPredicted RBP12.66□□□□□ -0.38
TRAIP-203ENST00000473195 SGSHP51688 502 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 MFAP3P55082 362 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 SLC8A3P57103 927 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 YWHAEP62258 255 aaKnown RBP12.66□□□□□ -0.38
TRAIP-203ENST00000473195 RPL6Q02878 288 aaKnown RBP12.66□□□□□ -0.38
TRAIP-203ENST00000473195 NUMA1Q14980 2115 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 CAMK4Q16566 473 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 UAP1L1Q3KQV9 507 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 TRIM61Q5EBN2 209 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 CCDC183Q5T5S1 534 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 BSPRYQ5W0U4 402 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 SDE2Q6IQ49 451 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 PSAPL1Q6NUJ1 521 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 PMF1Q6P1K2 205 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 C11orf74Q86VG3 221 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 CACUL1Q86Y37 369 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 SIX6OS1Q8N1H7 587 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 ARHGAP18Q8N392 663 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 LMO3Q8TAP4 145 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 DDI1Q8WTU0 396 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 CEP63Q96MT8 703 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 CDK5RAP1Q96SZ6 601 aaKnown RBP12.66□□□□□ -0.38
TRAIP-203ENST00000473195 GABRG3Q99928 467 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
TRAIP-203ENST00000473195 METTL14Q9HCE5 456 aaKnown RBP12.66□□□□□ -0.38
TRAIP-203ENST00000473195 STRIP2Q9ULQ0 834 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 STON1Q9Y6Q2 735 aa12.66□□□□□ -0.38
TRAIP-203ENST00000473195 FRYQ5TBA9 3013 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 M0QYV0 167 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 KCNK5O95279 499 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 TBXAS1P24557 533 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-203ENST00000473195 CHKAP35790 457 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 IL12RB1P42701 662 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 MAPK8P45983 427 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 DAOAP59103 153 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 KCNH2Q12809 1159 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 ACAP1Q15027 740 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 TRIP4Q15650 581 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-203ENST00000473195 KLHL40Q2TBA0 621 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 LYSMD4Q5XG99 296 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 TMEM215Q68D42 235 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 CAVIN1Q6NZI2 390 aaKnown RBP12.65□□□□□ -0.38
TRAIP-203ENST00000473195 KIAA1324Q6UXG2 1013 aaKnown RBP12.65□□□□□ -0.38
TRAIP-203ENST00000473195 SLC41A1Q8IVJ1 513 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 RBBP8NLQ8NC74 664 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-203ENST00000473195 GPT2Q8TD30 523 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 RNF139Q8WU17 664 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 KREMEN1Q96MU8 473 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 SRRTQ9BXP5 876 aaKnown RBP12.65□□□□□ -0.38
TRAIP-203ENST00000473195 GTPBP4Q9BZE4 634 aaKnown RBP12.65□□□□□ -0.38
TRAIP-203ENST00000473195 DCLK3Q9C098 648 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 MIS12Q9H081 205 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 RALYQ9UKM9 306 aaKnown RBP12.65□□□□□ -0.38
TRAIP-203ENST00000473195 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAIP-203ENST00000473195 ZNF510Q9Y2H8 683 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 PLXNA2O75051 1894 aa12.65□□□□□ -0.38
TRAIP-203ENST00000473195 WDFY3Q8IZQ1 3526 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms