RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TRIM11Q96F44 468 aa21.64■■□□□ 1.05
TOP3A-204ENST00000472959 SLC39A13Q96H72 371 aa21.64■■□□□ 1.05
TOP3A-204ENST00000472959 NPY6RQ99463 290 aa21.64■■□□□ 1.05
TOP3A-204ENST00000472959 ISCUQ9H1K1 167 aa21.64■■□□□ 1.05
TOP3A-204ENST00000472959 TBC1D17Q9HA65 648 aa21.64■■□□□ 1.05
TOP3A-204ENST00000472959 C11orf16Q9NQ32 467 aa21.64■■□□□ 1.05
TOP3A-204ENST00000472959 SPHK2Q9NRA0 654 aa21.64■■□□□ 1.05
TOP3A-204ENST00000472959 DDIT4Q9NX09 232 aa21.64■■□□□ 1.05
TOP3A-204ENST00000472959 HELZP42694 1942 aaKnown RBP21.64■■□□□ 1.05
TOP3A-204ENST00000472959 TECTAO75443 2155 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 SSU72P8A0A1W2PR75 194 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 KANSL1LA0AUZ9 987 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 SIGLEC16A6NMB1 481 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 PRR33A8MZF0 331 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 CYP17A1P05093 508 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 CDC25BP30305 580 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 GJA4P35212 333 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 EIF4A3P38919 411 aaKnown RBP21.63■■□□□ 1.05
TOP3A-204ENST00000472959 SLC11A2P49281 568 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
TOP3A-204ENST00000472959 SLC25A52Q3SY17 297 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 DNAJC24Q6P3W2 148 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 PHLDB2Q86SQ0 1253 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 FAM3CQ92520 227 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 FCRL2Q96LA5 508 aaPredicted RBP21.63■■□□□ 1.05
TOP3A-204ENST00000472959 SELENOOQ9BVL4 669 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 METTL5Q9NRN9 209 aaKnown RBP21.63■■□□□ 1.05
TOP3A-204ENST00000472959 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.63■■□□□ 1.05
TOP3A-204ENST00000472959 STOML2Q9UJZ1 356 aa21.63■■□□□ 1.05
TOP3A-204ENST00000472959 A0A087X0T9 212 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 M0QYT0 321 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 STK25O00506 426 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 ADCY5O95622 1261 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 F9P00740 461 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 APOEP02649 317 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 FAM228BP0C875 321 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 MYBL1P10243 752 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 RRM1P23921 792 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 FLT3P36888 993 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 SOX9P48436 509 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 PITX1P78337 314 aaPredicted RBP21.62■■□□□ 1.05
TOP3A-204ENST00000472959 GAD2Q05329 585 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 MTA1Q13330 715 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 LY6G5CQ5SRR4 150 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 CPXM2Q8N436 756 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 TC2NQ8N9U0 490 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 PGAP3Q96FM1 320 aaPredicted RBP21.62■■□□□ 1.05
TOP3A-204ENST00000472959 OSBPL6Q9BZF3 934 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 PARVAQ9NVD7 372 aa21.62■■□□□ 1.05
TOP3A-204ENST00000472959 KIF26AQ9ULI4 1882 aaPredicted RBP21.62■■□□□ 1.05
TOP3A-204ENST00000472959 TCRBV5S1A1TA0A578 114 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 ANKRD62A6NC57 917 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 SHISA7A6NL88 538 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 HOXC11O43248 304 aaPredicted RBP21.61■■□□□ 1.05
TOP3A-204ENST00000472959 PDGFBP01127 241 aaPredicted RBP21.61■■□□□ 1.05
TOP3A-204ENST00000472959 ADH5P11766 374 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 CCR1P32246 355 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 SULT1E1P49888 294 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 CLCN5P51795 746 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 ZC3H12AQ5D1E8 599 aaKnown RBP21.61■■□□□ 1.05
TOP3A-204ENST00000472959 ADGRF1Q5T601 910 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 ALKBH5Q6P6C2 394 aaKnown RBP21.61■■□□□ 1.05
TOP3A-204ENST00000472959 TMEM25Q86YD3 366 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 FAM217AQ8IXS0 508 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 FBXL6Q8N531 539 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 FLCNQ8NFG4 579 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 DDX50Q9BQ39 737 aaKnown RBP21.61■■□□□ 1.05
TOP3A-204ENST00000472959 IRX2Q9BZI1 471 aaPredicted RBP21.61■■□□□ 1.05
TOP3A-204ENST00000472959 DEF6Q9H4E7 631 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 MARK1Q9P0L2 795 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 SLC12A6Q9UHW9 1150 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 PAXBP1Q9Y5B6 917 aa21.61■■□□□ 1.05
TOP3A-204ENST00000472959 FAM86C2PA6NEL3 165 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 C2CD4BA6NLJ0 364 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 PDGFRAP16234 1089 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 SDC4P31431 198 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 RFC1P35251 1148 aaPredicted RBP21.6■■□□□ 1.05
TOP3A-204ENST00000472959 NME3Q13232 169 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 PPP2R5DQ14738 602 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 SLC18A3Q16572 532 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 ASTE1Q2TB18 679 aaPredicted RBP21.6■■□□□ 1.05
TOP3A-204ENST00000472959 PLEKHA7Q6IQ23 1121 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 TRNP1Q6NT89 227 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 SND1Q7KZF4 910 aaKnown RBP eCLIP21.6■■□□□ 1.05
TOP3A-204ENST00000472959 EMC1Q8N766 993 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 RXFP2Q8WXD0 754 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 RNF34Q969K3 372 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 CCDC42Q96M95 316 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 LTB4R2Q9NPC1 389 aa21.6■■□□□ 1.05
TOP3A-204ENST00000472959 KCNU1A8MYU2 1149 aa21.59■■□□□ 1.05
TOP3A-204ENST00000472959 TRDMT1O14717 391 aaKnown RBP21.59■■□□□ 1.05
TOP3A-204ENST00000472959 AKR1B10O60218 316 aa21.59■■□□□ 1.05
TOP3A-204ENST00000472959 ACSL4O60488 711 aa21.59■■□□□ 1.05
TOP3A-204ENST00000472959 CD72P21854 359 aa21.59■■□□□ 1.05
TOP3A-204ENST00000472959 EIF2DP41214 584 aaKnown RBP21.59■■□□□ 1.05
TOP3A-204ENST00000472959 PTPN9P43378 593 aa21.59■■□□□ 1.05
TOP3A-204ENST00000472959 CXCR3P49682 368 aa21.59■■□□□ 1.05
TOP3A-204ENST00000472959 DEUP1Q05D60 604 aa21.59■■□□□ 1.05
TOP3A-204ENST00000472959 MAMLD1Q13495 774 aa21.59■■□□□ 1.05
TOP3A-204ENST00000472959 GAB4Q2WGN9 574 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms