RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 LATS1O95835 1130 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 PENKP01210 267 aaPredicted RBP20.27■□□□□ 0.84
COMMD1-208ENST00000472729 WASP42768 502 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 TBX4P57082 545 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 RAPGEF1Q13905 1077 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 TCP11X2Q5H9J9 407 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 ADGRF1Q5T601 910 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 TMEM92Q6UXU6 159 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 BHLHA9Q7RTU4 235 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 C12orf50Q8NA57 414 aaPredicted RBP20.27■□□□□ 0.84
COMMD1-208ENST00000472729 MDGA1Q8NFP4 955 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 CLEC4CQ8WTT0 213 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 SHC3Q92529 594 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 SERPINB11Q96P15 392 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 SLC2A11Q9BYW1 496 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 SEMA4GQ9NTN9 838 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 ANO10Q9NW15 660 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 CDV3Q9UKY7 258 aaKnown RBP20.27■□□□□ 0.84
COMMD1-208ENST00000472729 INVSQ9Y283 1065 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 ANAPC1Q9H1A4 1944 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 FAM186AA6NE01 2351 aa20.27■□□□□ 0.83
COMMD1-208ENST00000472729 KIF26AQ9ULI4 1882 aaPredicted RBP20.26■□□□□ 0.83
COMMD1-208ENST00000472729 VPS13AQ96RL7 3174 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 TSPAN3O60637 253 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 APBA1Q02410 837 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 PUM1Q14671 1186 aaKnown RBP eCLIP20.26■□□□□ 0.83
COMMD1-208ENST00000472729 STARD3Q14849 445 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 CSRP2Q16527 193 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 FKBP15Q5T1M5 1219 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 FYB2Q5VWT5 728 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 MSANTD2Q6P1R3 559 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 TOGARAM2Q6ZUX3 1019 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 ANKS1BQ7Z6G8 1248 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 RASSF3Q86WH2 238 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 ENOX1Q8TC92 643 aaKnown RBP20.26■□□□□ 0.83
COMMD1-208ENST00000472729 ZC3H10Q96K80 434 aaKnown RBP20.26■□□□□ 0.83
COMMD1-208ENST00000472729 CIPCQ9C0C6 399 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 ARRDC1-AS1Q9H2J1 176 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 SAMSN1Q9NSI8 373 aaKnown RBP20.26■□□□□ 0.83
COMMD1-208ENST00000472729 SLC27A6Q9Y2P4 619 aa20.26■□□□□ 0.83
COMMD1-208ENST00000472729 EP300Q09472 2414 aaPredicted RBP20.26■□□□□ 0.83
COMMD1-208ENST00000472729 DCLK1O15075 740 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 NPC1O15118 1278 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 TIMM44O43615 452 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 YWHAZP63104 245 aaKnown RBP20.25■□□□□ 0.83
COMMD1-208ENST00000472729 PDCLQ13371 301 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 RSPO4Q2I0M5 234 aaPredicted RBP20.25■□□□□ 0.83
COMMD1-208ENST00000472729 PLK5Q496M5 336 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 EGFLAMQ63HQ2 1017 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 GPT2Q8TD30 523 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 IPO4Q8TEX9 1081 aaKnown RBP20.25■□□□□ 0.83
COMMD1-208ENST00000472729 PPP1R13BQ96KQ4 1090 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 SLC4A5Q9BY07 1137 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 POPDC2Q9HBU9 364 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 ACP6Q9NPH0 428 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 SLC12A6Q9UHW9 1150 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 PCDHGA5Q9Y5G8 931 aa20.25■□□□□ 0.83
COMMD1-208ENST00000472729 ANTXRLA6NF34 631 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 PRRT4C9JH25 899 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 E5RJQ4 531 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 GFRA2O00451 464 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 SYNCRIPO60506 623 aaKnown RBP20.24■□□□□ 0.83
COMMD1-208ENST00000472729 ADAM23O75077 832 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 APOEP02649 317 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 CISD3P0C7P0 127 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 CDK11BP21127 795 aaKnown RBP20.24■□□□□ 0.83
COMMD1-208ENST00000472729 CREB5Q02930 508 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 RING1Q06587 406 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 STX1AQ16623 288 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 AASDHQ4L235 1098 aaPredicted RBP20.24■□□□□ 0.83
COMMD1-208ENST00000472729 TMEM110Q86TL2 294 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 PASD1Q8IV76 773 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 ZNF557Q8N988 423 aaPredicted RBP20.24■□□□□ 0.83
COMMD1-208ENST00000472729 RNF34Q969K3 372 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 FBXO10Q9UK96 956 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 NAALADL1Q9UQQ1 740 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 TLR6Q9Y2C9 796 aa20.24■□□□□ 0.83
COMMD1-208ENST00000472729 BECN2A8MW95 431 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 FOXN3O00409 490 aaPredicted RBP20.23■□□□□ 0.83
COMMD1-208ENST00000472729 IRAK2O43187 625 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 GABBR2O75899 941 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 EPN2O95208 641 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 EIF4HQ15056 248 aaKnown RBP20.23■□□□□ 0.83
COMMD1-208ENST00000472729 EFHC1Q5JVL4 640 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 MIIPQ5JXC2 388 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 PRR23CQ6ZRP0 262 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 BEND5Q7L4P6 421 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 LPCAT2Q7L5N7 544 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 DGLUCYQ7Z3D6 616 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 DQX1Q8TE96 717 aaKnown RBP20.23■□□□□ 0.83
COMMD1-208ENST00000472729 RMDN1Q96DB5 314 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 PCMTD1Q96MG8 357 aaPredicted RBP20.23■□□□□ 0.83
COMMD1-208ENST00000472729 LSM14BQ9BX40 385 aaKnown RBP20.23■□□□□ 0.83
COMMD1-208ENST00000472729 LHX5Q9H2C1 402 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 CACNA2D2Q9NY47 1150 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 TAB2Q9NYJ8 693 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 PCDHGC3Q9UN70 934 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 PLA2G4CQ9UP65 541 aa20.23■□□□□ 0.83
COMMD1-208ENST00000472729 GPR179Q6PRD1 2367 aa20.22■□□□□ 0.83
COMMD1-208ENST00000472729 HELZP42694 1942 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms