RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 EXD1Q8NHP7 514 aa23.19■■□□□ 1.3
PAXBP1-208ENST00000472588 MAFAQ8NHW3 353 aaPredicted RBP23.19■■□□□ 1.3
PAXBP1-208ENST00000472588 KRT35Q92764 455 aa23.19■■□□□ 1.3
PAXBP1-208ENST00000472588 RBM41Q96IZ5 413 aaKnown RBP23.19■■□□□ 1.3
PAXBP1-208ENST00000472588 ADAM33Q9BZ11 813 aa23.19■■□□□ 1.3
PAXBP1-208ENST00000472588 WDR6Q9NNW5 1121 aaKnown RBP23.19■■□□□ 1.3
PAXBP1-208ENST00000472588 HCFC1R1Q9NWW0 138 aa23.19■■□□□ 1.3
PAXBP1-208ENST00000472588 CALCOCO1Q9P1Z2 691 aa23.19■■□□□ 1.3
PAXBP1-208ENST00000472588 A0A1W2PRU2 124 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 COCHO43405 550 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 GLP2RO95838 553 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 TBX18O95935 607 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 RARAP10276 462 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 HDCP19113 662 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 IL1R2P27930 398 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 GJC1P36383 396 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 CLUL1Q15846 466 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 EFHC2Q5JST6 749 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 ACBD5Q5T8D3 534 aaPredicted RBP23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 TMC5Q6UXY8 1006 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 MIB1Q86YT6 1006 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 MICALL1Q8N3F8 863 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 TRPC7Q9HCX4 862 aa23.18■■□□□ 1.3
PAXBP1-208ENST00000472588 TRAV19A0A0A6YYK7 116 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 SLC12A8A0AV02 714 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 APOEP02649 317 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 TCF4P15884 667 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 ADRA1BP35368 520 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 ATXN1P54253 815 aaKnown RBP23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 COPS2P61201 443 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 SCAPQ12770 1279 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 PDK2Q15119 407 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 SEL1L2Q5TEA6 688 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 NUGGCQ68CJ6 796 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 UNC45BQ8IWX7 931 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 ALG3Q92685 438 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 SLC39A13Q96H72 371 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 PEBP4Q96S96 227 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 RNF14Q9UBS8 474 aa23.17■■□□□ 1.3
PAXBP1-208ENST00000472588 C2orf78A6NCI8 922 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 MSI1O43347 362 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 OLFM2O95897 454 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 MBL2P11226 248 aaPredicted RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 MARCKSL1P49006 195 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 AMPD2Q01433 879 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 ITIH3Q06033 890 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 SMTNL2Q2TAL5 461 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 RAB6CQ53S08 254 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 KCNT1Q5JUK3 1230 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 RARS2Q5T160 578 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 TXNDC8Q6A555 127 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 GPR149Q86SP6 731 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 C12orf76Q8N812 135 aaPredicted RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 KCTD6Q8NC69 237 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 SHKBP1Q8TBC3 707 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 HSPH1Q92598 858 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 PLD4Q96BZ4 506 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 PSMB7Q99436 277 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 SNRNP25Q9BV90 132 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 TKTL2Q9H0I9 626 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 RAB6CQ9H0N0 254 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 TASP1Q9H6P5 420 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 ARHGEF38Q9NXL2 777 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 FZD10Q9ULW2 581 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 AP4E1Q9UPM8 1137 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 LINC01565O15544 149 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 KRT1P04264 644 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 CXCR5P32302 372 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 ZNF135P52742 658 aaPredicted RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 CYP4F8P98187 520 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 CCDC85BQ15834 202 aaPredicted RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 ZC3H12AQ5D1E8 599 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 PRSS36Q5K4E3 855 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 TXNRD3NBQ6F5E7 133 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 CES5AQ6NT32 575 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 CYP4V2Q6ZWL3 525 aaPredicted RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 VSIG1Q86XK7 387 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 CCDC50Q8IVM0 306 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 CCDC185Q8N715 623 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 MAB21L3Q8N8X9 362 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 ATP6V0D2Q8N8Y2 350 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 PPM1EQ8WY54 764 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 HAPLN3Q96S86 360 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 RNF38Q9H0F5 515 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 CDC23Q9UJX2 597 aa23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 MRPS23Q9Y3D9 190 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-208ENST00000472588 LRRD1A4D1F6 860 aa23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 IGLV3-27P01718 113 aa23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 CKMP06732 381 aa23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 CCR2P41597 374 aa23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 HARS2P49590 506 aaKnown RBP23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 KRT81Q14533 505 aa23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 DPYSL2Q16555 572 aa23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 CTC1Q2NKJ3 1217 aa23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 ATP13A4Q4VNC1 1196 aa23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 GPR158Q5T848 1215 aa23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 FCRL2Q96LA5 508 aaPredicted RBP23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 NAP1L3Q99457 506 aaPredicted RBP23.15■■□□□ 1.3
PAXBP1-208ENST00000472588 DHX35Q9H5Z1 703 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms