RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 DAB1O75553 588 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 GRAP2O75791 330 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 TRUB2O95900 331 aaKnown RBP14.79□□□□□ -0.04
BRCA1-211ENST00000472490 IGLV3-27P01718 113 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 APOEP02649 317 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 KLKB1P03952 638 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 CHRNB1P11230 501 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 GALK1P51570 392 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 TAF5Q15542 800 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 TSR1Q2NL82 804 aaKnown RBP14.79□□□□□ -0.04
BRCA1-211ENST00000472490 ADGRF1Q5T601 910 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 DENND4CQ5VZ89 1909 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 TXNDC11Q6PKC3 985 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 MMS22LQ6ZRQ5 1243 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 TPGS1Q6ZTW0 290 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 TMEM25Q86YD3 366 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 PHF13Q86YI8 300 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-211ENST00000472490 CPLX3Q8WVH0 158 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 WBP2Q969T9 261 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 PIWIL1Q96J94 861 aaKnown RBP14.79□□□□□ -0.04
BRCA1-211ENST00000472490 BBS2Q9BXC9 721 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 IRF2BPLQ9H1B7 796 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 HAUS4Q9H6D7 363 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 FAM204AQ9H8W3 233 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 LMAN1LQ9HAT1 526 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.79□□□□□ -0.04
BRCA1-211ENST00000472490 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.79□□□□□ -0.04
BRCA1-211ENST00000472490 ADAM22Q9P0K1 906 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 MARK1Q9P0L2 795 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 STOML2Q9UJZ1 356 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 MTF2Q9Y483 593 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-211ENST00000472490 PAXBP1Q9Y5B6 917 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 MYO10Q9HD67 2058 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 NEDD8-MDP1E9PL57 170 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 IRAK2O43187 625 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 F9P00740 461 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 GYPCP04921 128 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 ABCB4P21439 1286 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 CCR1P32246 355 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 GSCP56915 257 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-211ENST00000472490 RNASE9P60153 205 aaKnown RBP14.78□□□□□ -0.04
BRCA1-211ENST00000472490 CCINQ13939 588 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 PPP2R5DQ14738 602 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 TDRD12Q587J7 1177 aaKnown RBP14.78□□□□□ -0.04
BRCA1-211ENST00000472490 ACAD10Q6JQN1 1059 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 SND1Q7KZF4 910 aaKnown RBP eCLIP14.78□□□□□ -0.04
BRCA1-211ENST00000472490 TAC4Q86UU9 113 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 ZNF687Q8N1G0 1237 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 DTWD2Q8NBA8 298 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 SLC30A5Q8TAD4 765 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 RNF34Q969K3 372 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 VCPIP1Q96JH7 1222 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 PNKPQ96T60 521 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 PCDHB18PQ96TA0 734 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 C11orf70Q9BRQ4 267 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 TRIM5Q9C035 493 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 DDIT4Q9NX09 232 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 DLGAP2Q9P1A6 1054 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 DEC1Q9P2X7 70 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 MYH10P35580 1976 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 ZNF638Q14966 1978 aaKnown RBP14.78□□□□□ -0.04
BRCA1-211ENST00000472490 ANAPC1Q9H1A4 1944 aa14.78□□□□□ -0.04
BRCA1-211ENST00000472490 TECTAO75443 2155 aa14.77□□□□□ -0.04
BRCA1-211ENST00000472490 TYW5A2RUC4 315 aaKnown RBP14.77□□□□□ -0.05
BRCA1-211ENST00000472490 ANKRD62A6NC57 917 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 GOLGA8SH3BPF8 625 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 GALR2O43603 387 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-211ENST00000472490 CACNG3O60359 315 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 ATG13O75143 517 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 IGLV3-25P01717 112 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 APODP05090 189 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 SERPING1P05155 500 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 GZMAP12544 262 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 TYRP14679 529 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 DESP17661 470 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 CASP14P31944 242 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 SLC25A52Q3SY17 297 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 MPPE1Q53F39 396 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 MAMSTRQ6ZN01 415 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 VSTM4Q8IW00 320 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 FAM217AQ8IXS0 508 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 DRC7Q8IY82 874 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 ATP6V0D2Q8N8Y2 350 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 ZNF557Q8N988 423 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-211ENST00000472490 ADAM32Q8TC27 787 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 DDI1Q8WTU0 396 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 CHFRQ96EP1 664 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 SLC39A13Q96H72 371 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 BTN2A3PQ96KV6 586 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 SELENOOQ9BVL4 669 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 CHRDQ9H2X0 955 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 ZNHIT6Q9NWK9 470 aaKnown RBP14.77□□□□□ -0.05
BRCA1-211ENST00000472490 ARIH1Q9Y4X5 557 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-211ENST00000472490 MYO16Q9Y6X6 1858 aa14.77□□□□□ -0.05
BRCA1-211ENST00000472490 M0QYT0 321 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 ACSL4O60488 711 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 KRT3P12035 628 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 OPRD1P41143 372 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 GRIA2P42262 883 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 NME3Q13232 169 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms