RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 PYGMP11217 842 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 HOXB8P17481 243 aaPredicted RBP20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 CCR1P32246 355 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 GTF2F1P35269 517 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 CCR2P41597 374 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 ZNF135P52742 658 aaPredicted RBP20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 SLC7A9P82251 487 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 RBM10P98175 930 aaKnown RBP20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 NRG1Q02297 640 aaPredicted RBP20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 SEMA3BQ13214 749 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 NME3Q13232 169 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 PDK2Q15119 407 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 CLUL1Q15846 466 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 WHAMMP3Q1A5X7 153 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 ATP13A4Q4VNC1 1196 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 ACBD5Q5T8D3 534 aaPredicted RBP20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 SHKBP1Q8TBC3 707 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 TSC1Q92574 1164 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 MRPS31Q92665 395 aaKnown RBP20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 AZIN2Q96A70 460 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 FAF2Q96CS3 445 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 HAPLN3Q96S86 360 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 CORO1BQ9BR76 489 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 OSBPL2Q9H1P3 480 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 MTMR10Q9NXD2 777 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 RCOR3Q9P2K3 495 aaPredicted RBP20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 SFMBT1Q9UHJ3 866 aa20.19■□□□□ 0.82
CHMP2B-204ENST00000472024 URI1O94763 535 aaPredicted RBP20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 KDELR1P24390 212 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 WEE1P30291 646 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 SSR1P43307 286 aaKnown RBP20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 EFEMP1Q12805 493 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 ADGRE1Q14246 886 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 ARL13BQ3SXY8 428 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 HABP4Q5JVS0 413 aaKnown RBP20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 DNTTIP2Q5QJE6 756 aaKnown RBP20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 ANKRD54Q6NXT1 300 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 SCYL2Q6P3W7 929 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 RAPGEF5Q92565 580 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 ZFRQ96KR1 1074 aaKnown RBP20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 GCNAQ96QF7 691 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 KLF16Q9BXK1 252 aaPredicted RBP20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 WDCPQ9H6R7 721 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 ZWILCHQ9H900 591 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 ANLNQ9NQW6 1124 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 HCFC1R1Q9NWW0 138 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 NUDT5Q9UKK9 219 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 AP4E1Q9UPM8 1137 aa20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 PRRC2BQ5JSZ5 2229 aaKnown RBP20.18■□□□□ 0.82
CHMP2B-204ENST00000472024 C2orf78A6NCI8 922 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 NRG2O14511 850 aaPredicted RBP20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 ZNF197O14709 1029 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 MSI1O43347 362 aaKnown RBP20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 SRGAP2O75044 1071 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 KRT1P04264 644 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 L1CAMP32004 1257 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 CXCR5P32302 372 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 HTR7P34969 479 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 CDKN2BP42772 138 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 TBX4P57082 545 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 COG7P83436 770 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 SMTNL2Q2TAL5 461 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 KCNT1Q5JUK3 1230 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 ARTNQ5T4W7 220 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 NUGGCQ68CJ6 796 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 SYCE2Q6PIF2 218 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 PDZD4Q76G19 769 aaPredicted RBP20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 GPR149Q86SP6 731 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 PLD4Q96BZ4 506 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 C1orf74Q96LT6 269 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 ZNF670Q9BS34 389 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 RNF38Q9H0F5 515 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 PRDM16Q9HAZ2 1276 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 PCDH18Q9HCL0 1135 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 RASAL2Q9UJF2 1139 aa20.17■□□□□ 0.82
CHMP2B-204ENST00000472024 ZNF185O15231 689 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 LATS1O95835 1130 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 IL4RP24394 825 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 HCAR3P49019 387 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 ITIH3Q06033 890 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 DPYSL3Q14195 570 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 CA9Q16790 459 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 SLC5A9Q2M3M2 681 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 ZC3H12AQ5D1E8 599 aaKnown RBP20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 EFHC2Q5JST6 749 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 SEL1L2Q5TEA6 688 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 ZNF697Q5TEC3 545 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 MFSD7Q6UXD7 560 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 SPOCD1Q6ZMY3 1216 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 ANKS1BQ7Z6G8 1248 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 MAP7D3Q8IWC1 876 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 SMG7Q92540 1137 aaKnown RBP20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 PSMB7Q99436 277 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 TKTL2Q9H0I9 626 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 ATXN3LQ9H3M9 355 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 TASP1Q9H6P5 420 aa20.16■□□□□ 0.82
CHMP2B-204ENST00000472024 hCG_1818297A0A087WSY0 165 aa20.15■□□□□ 0.82
CHMP2B-204ENST00000472024 A0A1W2PRU2 124 aa20.15■□□□□ 0.82
CHMP2B-204ENST00000472024 SLC12A8A0AV02 714 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms