RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 LRRN4Q8WUT4 740 aa18■□□□□ 0.47
RRP1-202ENST00000471909 LRRC37BQ96QE4 947 aa18■□□□□ 0.47
RRP1-202ENST00000471909 CHST12Q9NRB3 414 aa18■□□□□ 0.47
RRP1-202ENST00000471909 NKX1-2Q9UD57 310 aaPredicted RBP18■□□□□ 0.47
RRP1-202ENST00000471909 TLL2Q9Y6L7 1015 aa18■□□□□ 0.47
RRP1-202ENST00000471909 THP07101 528 aa18■□□□□ 0.47
RRP1-202ENST00000471909 CALB2P22676 271 aa18■□□□□ 0.47
RRP1-202ENST00000471909 TARSP26639 723 aaKnown RBP18■□□□□ 0.47
RRP1-202ENST00000471909 MATKP42679 507 aa18■□□□□ 0.47
RRP1-202ENST00000471909 TM4SF4P48230 202 aa18■□□□□ 0.47
RRP1-202ENST00000471909 CLCNKBP51801 687 aa18■□□□□ 0.47
RRP1-202ENST00000471909 MGAT3Q09327 533 aa18■□□□□ 0.47
RRP1-202ENST00000471909 MDH1BQ5I0G3 518 aa18■□□□□ 0.47
RRP1-202ENST00000471909 SYCP2LQ5T4T6 812 aa18■□□□□ 0.47
RRP1-202ENST00000471909 DEFB106AQ8N104 65 aa18■□□□□ 0.47
RRP1-202ENST00000471909 FBXO36Q8NEA4 188 aa18■□□□□ 0.47
RRP1-202ENST00000471909 RTP4Q96DX8 246 aa18■□□□□ 0.47
RRP1-202ENST00000471909 TMEM237Q96Q45 408 aa18■□□□□ 0.47
RRP1-202ENST00000471909 KIF9Q9HAQ2 790 aa18■□□□□ 0.47
RRP1-202ENST00000471909 SPC25Q9HBM1 224 aa18■□□□□ 0.47
RRP1-202ENST00000471909 ARL5CA6NH57 179 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 FAM163BP0C2L3 166 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 NDUFV1P49821 464 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 DNAJC3Q13217 504 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 KCNJ11Q14654 390 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 BBS9Q3SYG4 887 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 TRIM68Q6AZZ1 485 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 CLEC20AQ6ZU45 233 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 PDIK1LQ8N165 341 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 TEX9Q8N6V9 391 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 C3orf58Q8NDZ4 430 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 FAM149B1Q96BN6 582 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 KCTD15Q96SI1 283 aaPredicted RBP17.99■□□□□ 0.47
RRP1-202ENST00000471909 OSBPL1AQ9BXW6 950 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 CRTAC1Q9NQ79 661 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 DDX43Q9NXZ2 648 aaKnown RBP17.99■□□□□ 0.47
RRP1-202ENST00000471909 RABGEF1Q9UJ41 708 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 HAO1Q9UJM8 370 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 PHTF1Q9UMS5 762 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 BCLAF3A2AJT9 711 aaKnown RBP17.99■□□□□ 0.47
RRP1-202ENST00000471909 E7ENQ6 273 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 SEPT4O43236 478 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 ADAMTS4O75173 837 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 GNAZP19086 355 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 ALDH3A1P30838 453 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 RNASELQ05823 741 aaKnown RBP17.99■□□□□ 0.47
RRP1-202ENST00000471909 SLC10A2Q12908 348 aaPredicted RBP17.99■□□□□ 0.47
RRP1-202ENST00000471909 AGMOQ6ZNB7 445 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 C3orf62Q6ZUJ4 267 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 STRADAQ7RTN6 431 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 TRABD2AQ86V40 505 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 ATP11CQ8NB49 1132 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 INPP5DQ92835 1189 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 SPATS2LQ9NUQ6 558 aaKnown RBP17.99■□□□□ 0.47
RRP1-202ENST00000471909 ZFATQ9P243 1243 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 CHKBQ9Y259 395 aa17.99■□□□□ 0.47
RRP1-202ENST00000471909 TIMM13Q9Y5L4 95 aaPredicted RBP17.99■□□□□ 0.47
RRP1-202ENST00000471909 PEX11AO75192 247 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 SPAG7O75391 227 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 DCTN3O75935 186 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 PITX1P78337 314 aaPredicted RBP17.98■□□□□ 0.47
RRP1-202ENST00000471909 MRPS5P82675 430 aaKnown RBP17.98■□□□□ 0.47
RRP1-202ENST00000471909 GBE1Q04446 702 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 NR1H3Q13133 447 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 SLC25A52Q3SY17 297 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 FAM131BQ86XD5 332 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 PYROXD2Q8N2H3 581 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 ZNF483Q8TF39 744 aaPredicted RBP17.98■□□□□ 0.47
RRP1-202ENST00000471909 MRRFQ96E11 262 aaKnown RBP17.98■□□□□ 0.47
RRP1-202ENST00000471909 CSPG4P5Q96PW8 444 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 RAB6BQ9NRW1 208 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 PAK5Q9P286 719 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 CFAP69A5D8W1 941 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 CAPN15O75808 1086 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 ASMTLO95671 621 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 ZBED1O96006 694 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 SCNN1GP51170 649 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 YWHAZP63104 245 aaKnown RBP17.98■□□□□ 0.47
RRP1-202ENST00000471909 NKX3-2P78367 333 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 PRKCZQ05513 592 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 CACNB2Q08289 660 aaPredicted RBP17.98■□□□□ 0.47
RRP1-202ENST00000471909 SPARCL1Q14515 664 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 PKN2Q16513 984 aaKnown RBP17.98■□□□□ 0.47
RRP1-202ENST00000471909 DCAF6Q58WW2 860 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 EFHC2Q5JST6 749 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 OTUD1Q5VV17 481 aaPredicted RBP17.98■□□□□ 0.47
RRP1-202ENST00000471909 IGDCC3Q8IVU1 814 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 HACE1Q8IYU2 909 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 KCTD13Q8WZ19 329 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 PAAF1Q9BRP4 392 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 MED10Q9BTT4 135 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 LRRC42Q9Y546 428 aa17.98■□□□□ 0.47
RRP1-202ENST00000471909 A6NHS1 94 aa17.97■□□□□ 0.47
RRP1-202ENST00000471909 GPR182O15218 404 aa17.97■□□□□ 0.47
RRP1-202ENST00000471909 PIAS1O75925 651 aa17.97■□□□□ 0.47
RRP1-202ENST00000471909 ASGR1P07306 291 aa17.97■□□□□ 0.47
RRP1-202ENST00000471909 SULT1E1P49888 294 aa17.97■□□□□ 0.47
RRP1-202ENST00000471909 RABGGTBP53611 331 aa17.97■□□□□ 0.47
RRP1-202ENST00000471909 MAP3K7CLP57077 242 aa17.97■□□□□ 0.47
RRP1-202ENST00000471909 EFTUD2Q15029 972 aaKnown RBP eCLIP17.97■□□□□ 0.471e-7■■■■■ 52.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms