RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 ELANEP08246 267 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 ARP10275 920 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 NPTX2P47972 431 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 PRKAG1P54619 331 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 ATP1A4Q13733 1029 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 CNGB1Q14028 1251 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-204ENST00000471245 E2F2Q14209 437 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 PREPLQ4J6C6 727 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-204ENST00000471245 HS1BP3Q53T59 392 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 CERCAMQ5T4B2 595 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 SULT6B1Q6IMI4 303 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 ARMC6Q6NXE6 501 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 LVRNQ6Q4G3 990 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 KLHL17Q6TDP4 642 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 MICALCLQ6ZW33 695 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 SLC15A3Q8IY34 581 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 ADGRG5Q8IZF4 528 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 SPPL3Q8TCT6 385 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 USP13Q92995 863 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-204ENST00000471245 UBXN10Q96LJ8 280 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 ZSCAN31Q96LW9 406 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-204ENST00000471245 SAYSD1Q9NPB0 183 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 TRPM5Q9NZQ8 1165 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 DNAJB11Q9UBS4 358 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 VPS51Q9UID3 782 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 SCAF8Q9UPN6 1271 aaKnown RBP6.45□□□□□ -1.38
CKS1B-204ENST00000471245 JAG2Q9Y219 1238 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 SCN7AQ01118 1682 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 PDE4DIPQ5VU43 2346 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 A0A1B0GVC2 190 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 MYADML2A6NDP7 307 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 HMGB1P1B2RPK0 211 aaPredicted RBP6.44□□□□□ -1.38
CKS1B-204ENST00000471245 hCG_1984214I3L0E3 225 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 RGS10O43665 173 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 TRIAP1O43715 76 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 ZNF623O75123 536 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 CSF1RP07333 972 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 CST5P28325 142 aaPredicted RBP6.44□□□□□ -1.38
CKS1B-204ENST00000471245 CD6P30203 668 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 HIBADHP31937 336 aaKnown RBP6.44□□□□□ -1.38
CKS1B-204ENST00000471245 ALDH18A1P54886 795 aaKnown RBP6.44□□□□□ -1.38
CKS1B-204ENST00000471245 CXADRP78310 365 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 GPS1Q13098 491 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 CRHR2Q13324 411 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 EFR3AQ14156 821 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 FBXO47Q5MNV8 452 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 ARHGAP40Q5TG30 622 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 B3GNTL1Q67FW5 361 aaPredicted RBP6.44□□□□□ -1.38
CKS1B-204ENST00000471245 RGS7BPQ6MZT1 257 aaPredicted RBP6.44□□□□□ -1.38
CKS1B-204ENST00000471245 SUGP1Q8IWZ8 645 aaKnown RBP6.44□□□□□ -1.38
CKS1B-204ENST00000471245 TMEM132CQ8N3T6 1108 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 DNAJB14Q8TBM8 379 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 SNX19Q92543 992 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 PPP2R3CQ969Q6 453 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 BOD1Q96IK1 185 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 RTKNQ9BST9 563 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 DDX23Q9BUQ8 820 aaKnown RBP6.44□□□□□ -1.38
CKS1B-204ENST00000471245 BDH2Q9BUT1 245 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 PRDM8Q9NQV8 689 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 SORCS3Q9UPU3 1222 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 MRPS17Q9Y2R5 130 aaKnown RBP6.44□□□□□ -1.38
CKS1B-204ENST00000471245 UBR2Q8IWV8 1755 aa6.44□□□□□ -1.38
CKS1B-204ENST00000471245 A0A0B4J269 797 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 AHRRA9YTQ3 701 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 H0YIN7 160 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 K7ESM1 405 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 FCHO1O14526 889 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 FAM155BO75949 473 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 ACTL6BO94805 426 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 ZFPL1O95159 310 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 VIPP01282 170 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 SERPINB2P05120 415 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 PDE6CP51160 858 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 BCAT1P54687 386 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 TUBB3Q13509 450 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 CCNIQ14094 377 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 RRP1BQ14684 758 aaKnown RBP6.43□□□□□ -1.38
CKS1B-204ENST00000471245 TAF5Q15542 800 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 CYP2A13Q16696 494 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 TIGD6Q17RP2 521 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 DEFB115Q30KQ5 88 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 RBM20Q5T481 1227 aaKnown RBP6.43□□□□□ -1.38
CKS1B-204ENST00000471245 JAKMIP3Q5VZ66 844 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 ICE2Q659A1 982 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 SP5Q6BEB4 398 aaPredicted RBP6.43□□□□□ -1.38
CKS1B-204ENST00000471245 ABLIM2Q6H8Q1 611 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 C2CD5Q86YS7 1000 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 RASGRP3Q8IV61 690 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 MBD3L2Q8NHZ7 208 aaPredicted RBP6.43□□□□□ -1.38
CKS1B-204ENST00000471245 THAP4Q8WY91 577 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 FAM167BQ9BTA0 163 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 PABPC3Q9H361 631 aaKnown RBP6.43□□□□□ -1.38
CKS1B-204ENST00000471245 TMEM74BQ9NUR3 256 aa6.43□□□□□ -1.38
CKS1B-204ENST00000471245 AURKAIP1Q9NWT8 199 aaPredicted RBP6.43□□□□□ -1.38
CKS1B-204ENST00000471245 WDR33Q9C0J8 1336 aaKnown RBP6.43□□□□□ -1.38
CKS1B-204ENST00000471245 F5H697 171 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 EIF3FO00303 357 aaPredicted RBP6.42□□□□□ -1.38
CKS1B-204ENST00000471245 RNASET2O00584 256 aaKnown RBP6.42□□□□□ -1.38
CKS1B-204ENST00000471245 SCAF4O95104 1147 aaKnown RBP6.42□□□□□ -1.38
CKS1B-204ENST00000471245 SRGNP10124 158 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms