RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 COQ9O75208 318 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 MYL4P12829 197 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 ALADP13716 330 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 EGR1P18146 543 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 GNALP38405 381 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 ZNF84P51523 738 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 JAK3P52333 1124 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 SLC5A9Q2M3M2 681 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 LEXMQ3ZCV2 418 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 HSP90AB2PQ58FF8 381 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 FAM209BQ5JX69 171 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 CC2D1BQ5T0F9 858 aaKnown RBP5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 MRNIPQ6NTE8 343 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 P3H2Q8IVL5 708 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 SMC5Q8IY18 1101 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 CLASRPQ8N2M8 674 aaKnown RBP5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 ZNF548Q8NEK5 533 aaPredicted RBP5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 ABHD5Q8WTS1 349 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 CAMK1GQ96NX5 476 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 FCRL5Q96RD9 977 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 CINPQ9BW66 212 aaPredicted RBP5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 ADGRE3Q9BY15 652 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 MAGEB5Q9BZ81 275 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 NUAK2Q9H093 628 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 RXFP3Q9NSD7 469 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 RGL1Q9NZL6 768 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 SIRT4Q9Y6E7 314 aaPredicted RBP5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 ZMYM2Q9UBW7 1377 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 CCDC194A0A1B0GVG4 234 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 FAM234BA2RU67 622 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 FGF18O76093 207 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 PLAUP00749 431 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 TNFRSF1BP20333 461 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 DRD1P21728 446 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 TNFSF4P23510 183 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 LAMB3Q13751 1172 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 ARL13BQ3SXY8 428 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 PXDC1Q5TGL8 231 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 RFX6Q8HWS3 928 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 PARD3BQ8TEW8 1205 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 NAP1L5Q96NT1 182 aaPredicted RBP5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 STARD7Q9NQZ5 370 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 TERF2IPQ9NYB0 399 aa5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 LAS1LQ9Y4W2 734 aaKnown RBP5.78□□□□□ -1.48
PRPF40A-206ENST00000471167 SLC22A23A1A5C7 686 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 SOCS2O14508 198 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 HOXD12P35452 270 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 SOX2P48431 317 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 C16orf89Q6UX73 402 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 BEND5Q7L4P6 421 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 NGDNQ8NEJ9 315 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 MSI2Q96DH6 328 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 C18orf8Q96DM3 657 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 TRMT61AQ96FX7 289 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 PKNOX2Q96KN3 472 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 SNX27Q96L92 541 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 UBA5Q9GZZ9 404 aa5.77□□□□□ -1.49
PRPF40A-206ENST00000471167 KIF3BO15066 747 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 INPPL1O15357 1258 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 CTIFO43310 598 aaKnown RBP5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 RNF8O76064 485 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 ITGB6P18564 788 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 NDUFS1P28331 727 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 DUSP1P28562 367 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 DGKQP52824 942 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 FOXG1P55316 489 aaPredicted RBP5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 ID2Q02363 134 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 PFKFB3Q16875 520 aaPredicted RBP5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 ZNF260Q3ZCT1 412 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 CCDC144NLQ6NUI1 221 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 MSANTD2Q6P1R3 559 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 ACSM6Q6P461 480 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 USP17L6PQ6QN14 398 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 RBM44Q6ZP01 1051 aaKnown RBP5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 BRI3BPQ8WY22 251 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 GJA10Q969M2 543 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 MCRS1Q96EZ8 462 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 HMCESQ96FZ2 354 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 RIPOR3Q96MK2 946 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 SCNM1Q9BWG6 230 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 ZCWPW1Q9H0M4 648 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 ZBTB40Q9NUA8 1239 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 TMOD4Q9NZQ9 345 aa5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 HEMK1Q9Y5R4 338 aaPredicted RBP5.76□□□□□ -1.49
PRPF40A-206ENST00000471167 ANO9A1A5B4 782 aa5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 ZSCAN9O15535 394 aaPredicted RBP5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 CREB3O43889 395 aa5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 CCNT2O60583 730 aaKnown RBP5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 TAF5LO75529 589 aa5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 EIF3JO75822 258 aaKnown RBP5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 KAT7O95251 611 aa5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 BMP15O95972 392 aa5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 TACR3P29371 465 aa5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 IGHMBP2P38935 993 aaKnown RBP5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 STAT6P42226 847 aa5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 AGTR2P50052 363 aa5.75□□□□□ -1.49
PRPF40A-206ENST00000471167 HSF1Q00613 529 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms