RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 C16orf89Q6UX73 402 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 RANBP10Q6VN20 620 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 ZNF527Q8NB42 609 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 OR1N1Q8NGS0 311 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 SLC22A17Q8WUG5 538 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 NUDT22Q9BRQ3 303 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 ADGRE3Q9BY15 652 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 HELLSQ9NRZ9 838 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 PPP6CO00743 305 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 NPC1O15118 1278 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 TUBB4AP04350 444 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 JAK3P52333 1124 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 SPARCL1Q14515 664 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 ELF2Q15723 593 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 CC2D1BQ5T0F9 858 aaKnown RBP6.31□□□□□ -1.4
SSB-209ENST00000470621 VSTM1Q6UX27 236 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 TFAP2DQ7Z6R9 452 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 YTHDF3Q7Z739 585 aaKnown RBP6.31□□□□□ -1.4
SSB-209ENST00000470621 FAM71BQ8TC56 605 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 HIC2Q96JB3 615 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 PCDHB7Q9Y5E2 793 aa6.31□□□□□ -1.4
SSB-209ENST00000470621 WDR17Q8IZU2 1322 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 SMIM35A0A1B0GVV1 85 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 GXYLT2A0PJZ3 443 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 GOLGA6L3A6NEY3 463 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 F5H423 210 aaPredicted RBP6.3□□□□□ -1.4
SSB-209ENST00000470621 M0QYT0 321 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 RRHO14718 337 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 DNPH1O43598 174 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 PEPDP12955 493 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 AKT1P31749 480 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 MORC3Q14149 939 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 PUM3Q15397 648 aaKnown RBP6.3□□□□□ -1.4
SSB-209ENST00000470621 PFKFB4Q16877 469 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 TUBB8Q3ZCM7 444 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 SLC18B1Q6NT16 456 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 ACSM6Q6P461 480 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 SLC2A7Q6PXP3 512 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 NEK8Q86SG6 692 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 ATG16L2Q8NAA4 619 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 OSR1Q8TAX0 266 aaPredicted RBP6.3□□□□□ -1.4
SSB-209ENST00000470621 ZNF398Q8TD17 642 aa6.3□□□□□ -1.4
SSB-209ENST00000470621 EIF3CQ99613 913 aaKnown RBP6.3□□□□□ -1.4
SSB-209ENST00000470621 TRIM38O00635 465 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 PRYO14603 147 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 PEX14O75381 377 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 RPP40O75818 363 aaKnown RBP6.29□□□□□ -1.4
SSB-209ENST00000470621 CER1O95813 267 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 PRR35P0CG20 571 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 GYS1P13807 737 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 CERS1P27544 350 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 ABCG1P45844 678 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 ALDH18A1P54886 795 aaKnown RBP6.29□□□□□ -1.4
SSB-209ENST00000470621 YPEL5P62699 121 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 CSHL1Q14406 222 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 ZNF268Q14587 947 aaPredicted RBP6.29□□□□□ -1.4
SSB-209ENST00000470621 C10orf62Q5T681 223 aaPredicted RBP6.29□□□□□ -1.4
SSB-209ENST00000470621 LIN54Q6MZP7 749 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 KYAT3Q6YP21 454 aaKnown RBP6.29□□□□□ -1.4
SSB-209ENST00000470621 ZNF813Q6ZN06 617 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 KRT27Q7Z3Y8 459 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 GALNT16Q8N428 558 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 OVCA2Q8WZ82 227 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 NPIPB3Q92617 1050 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 AKAP1Q92667 903 aaKnown RBP eCLIP6.29□□□□□ -1.4
SSB-209ENST00000470621 MAP4K1Q92918 833 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 ELOVL1Q9BW60 279 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 CDCP1Q9H5V8 836 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 MLXIPLQ9NP71 852 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 RXFP3Q9NSD7 469 aa6.29□□□□□ -1.4
SSB-209ENST00000470621 NDUFS1P28331 727 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 DUSP1P28562 367 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 CHAF1AQ13111 956 aaPredicted RBP6.28□□□□□ -1.4
SSB-209ENST00000470621 SRSF7Q16629 238 aaKnown RBP eCLIP6.28□□□□□ -1.4
SSB-209ENST00000470621 BTBD16Q32M84 506 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 ZACNQ401N2 412 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 C4orf46Q504U0 113 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 KIAA1614Q5VZ46 1190 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 ZNF626Q68DY1 528 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 RINT1Q6NUQ1 792 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 MIS18BP1Q6P0N0 1132 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 GATAD2AQ86YP4 633 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 IGFBPL1Q8WX77 278 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 RPS6KC1Q96S38 1066 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 PAAF1Q9BRP4 392 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 NUAK2Q9H093 628 aa6.28□□□□□ -1.4
SSB-209ENST00000470621 COL3A1P02461 1466 aaPredicted RBP6.28□□□□□ -1.4
SSB-209ENST00000470621 SPATA31A1Q5TZJ5 1347 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 LOC105369274A0A096LPK9 316 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 LOC102723532A0A0G2JNH3 316 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 DNAJC9-AS1A6NH13 148 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 SKAP2O75563 359 aaPredicted RBP6.27□□□□□ -1.41
SSB-209ENST00000470621 MMP8P22894 467 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 IDUAP35475 653 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 STAT6P42226 847 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 VPS41P49754 854 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 TRIM14Q14142 442 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 PTK2BQ14289 1009 aa6.27□□□□□ -1.41
SSB-209ENST00000470621 EZH2Q15910 746 aaKnown RBP6.27□□□□□ -1.41
SSB-209ENST00000470621 CNGA3Q16281 694 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms