RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 KCNA1Q09470 495 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 CAMK2GQ13555 558 aaPredicted RBP12.65□□□□□ -0.38
LSM2-209ENST00000470083 PRAMEF14Q5SWL7 426 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 SERPINA13PQ6UXR4 307 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 Q6ZNB5 142 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 ANKS1BQ7Z6G8 1248 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 SFR1Q86XK3 245 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 RBBP8NLQ8NC74 664 aaPredicted RBP12.65□□□□□ -0.38
LSM2-209ENST00000470083 OR5B17Q8NGF7 314 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 RAD54LQ92698 747 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 SKA1Q96BD8 255 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 CALML4Q96GE6 196 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 AK8Q96MA6 479 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 LLPHQ9BRT6 129 aaKnown RBP12.65□□□□□ -0.38
LSM2-209ENST00000470083 DMAP1Q9NPF5 467 aaPredicted RBP12.65□□□□□ -0.38
LSM2-209ENST00000470083 CYLDQ9NQC7 956 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 ELOVL2Q9NXB9 296 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 ADAMTS1Q9UHI8 967 aa12.65□□□□□ -0.38
LSM2-209ENST00000470083 ATP8B3O60423 1300 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 NUMA1Q14980 2115 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 GOLGA8IPA6NC78 632 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 GOLGA8JA6NMD2 632 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
LSM2-209ENST00000470083 CKMT2P17540 419 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 EPHA8P29322 1005 aaPredicted RBP12.64□□□□□ -0.39
LSM2-209ENST00000470083 ATP5C1P36542 298 aaKnown RBP12.64□□□□□ -0.39
LSM2-209ENST00000470083 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
LSM2-209ENST00000470083 INSM1Q01101 510 aaPredicted RBP12.64□□□□□ -0.39
LSM2-209ENST00000470083 ZBTB16Q05516 673 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 DUOXA2Q1HG44 320 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 L1TD1Q5T7N2 865 aaKnown RBP12.64□□□□□ -0.39
LSM2-209ENST00000470083 FYB2Q5VWT5 728 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 ARL6IP4Q66PJ3 421 aaKnown RBP12.64□□□□□ -0.39
LSM2-209ENST00000470083 FAM35AQ86V20 835 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 CCDC83Q8IWF9 413 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 KCNE4Q8WWG9 221 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 PIWIL1Q96J94 861 aaKnown RBP12.64□□□□□ -0.39
LSM2-209ENST00000470083 ACCSQ96QU6 501 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 CBWD1Q9BRT8 395 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 TRIM4Q9C037 500 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 SGK2Q9HBY8 427 aa12.64□□□□□ -0.39
LSM2-209ENST00000470083 TLR8Q9NR97 1041 aaKnown RBP12.64□□□□□ -0.39
LSM2-209ENST00000470083 LRRK2Q5S007 2527 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 A0A1W2PPC4 97 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 A8MXQ7 604 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 IGHV4-34P06331 123 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 UBA7P41226 1012 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 ARRB1P49407 418 aaPredicted RBP12.63□□□□□ -0.39
LSM2-209ENST00000470083 ERVPABLB-1P60509 514 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 GRIN1Q05586 938 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 SFMBT2Q5VUG0 894 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 KLHDC10Q6PID8 442 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 LSMEM2Q8N112 164 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 SORCS1Q8WY21 1168 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 SMARCD1Q96GM5 515 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 SLC6A18Q96N87 628 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 DPH1Q9BZG8 443 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 CIPCQ9C0C6 399 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 FBXO44Q9H4M3 255 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 MRPL44Q9H9J2 332 aaKnown RBP12.63□□□□□ -0.39
LSM2-209ENST00000470083 FBRSQ9HAH7 460 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 SEL1LQ9UBV2 794 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 HEMK1Q9Y5R4 338 aaPredicted RBP12.63□□□□□ -0.39
LSM2-209ENST00000470083 AHCTF1Q8WYP5 2266 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 DOPEY2Q9Y3R5 2298 aa12.63□□□□□ -0.39
LSM2-209ENST00000470083 SPTAN1Q13813 2472 aaKnown RBP12.63□□□□□ -0.39
LSM2-209ENST00000470083 TMEM131Q92545 1883 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 TERTO14746 1132 aaKnown RBP12.62□□□□□ -0.39
LSM2-209ENST00000470083 KLK10O43240 276 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 TIMM44O43615 452 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 PRPF6O94906 941 aaKnown RBP12.62□□□□□ -0.39
LSM2-209ENST00000470083 MT-CO3P00414 261 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 KRT10P13645 584 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 ACP1P24666 158 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 TNNC1P63316 161 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
LSM2-209ENST00000470083 RILPL1Q5EBL4 403 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 TMEM215Q68D42 235 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 KIAA0895LQ68EN5 471 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 KDM7AQ6ZMT4 941 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 PAQR9Q6ZVX9 377 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 DYMQ7RTS9 669 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 FAM184AQ8NB25 1140 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 NOC3LQ8WTT2 800 aaKnown RBP12.62□□□□□ -0.39
LSM2-209ENST00000470083 LARP4BQ92615 738 aaKnown RBP12.62□□□□□ -0.39
LSM2-209ENST00000470083 GDF3Q9NR23 364 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 PCDHB1Q9Y5F3 818 aa12.62□□□□□ -0.39
LSM2-209ENST00000470083 FLNCQ14315 2725 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 CKAP5Q14008 2032 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 K7ENP7 123 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 STC2O76061 302 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 DNTTP04053 509 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 WNT1P04628 370 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 MPOP05164 745 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 CHKAP35790 457 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 RXRGP48443 463 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 NEK4P51957 841 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms