RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 UNC45BQ8IWX7 931 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 PIK3R5Q8WYR1 880 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 ZNF558Q96NG5 402 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 OXCT2Q9BYC2 517 aaPredicted RBP18.81■□□□□ 0.6
SMC4-211ENST00000469858 FBXO44Q9H4M3 255 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 WDCPQ9H6R7 721 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 RC3H2Q9HBD1 1191 aaKnown RBP18.81■□□□□ 0.6
SMC4-211ENST00000469858 RCOR3Q9P2K3 495 aaPredicted RBP18.81■□□□□ 0.6
SMC4-211ENST00000469858 H3BRJ5 948 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 I6L893 689 aaPredicted RBP18.81■□□□□ 0.6
SMC4-211ENST00000469858 RPL17P18621 184 aaKnown RBP18.81■□□□□ 0.6
SMC4-211ENST00000469858 AIF1P55008 147 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 USP46P62068 366 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 SMARCB1Q12824 385 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 DUSP4Q13115 394 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 MTMR3Q13615 1198 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 ARL13BQ3SXY8 428 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 RHBDF2Q6PJF5 856 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 CCDC25Q86WR0 208 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 RNF168Q8IYW5 571 aaPredicted RBP18.81■□□□□ 0.6
SMC4-211ENST00000469858 IQCKQ8N0W5 287 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 FAM71DQ8N9W8 422 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 BBOF1Q8ND07 529 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 RNF34Q969K3 372 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 TXLNGYQ9BZA5 131 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 MTRRQ9UBK8 725 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 SCML2Q9UQR0 700 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 ADAM12O43184 909 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 ZFXP17010 805 aaPredicted RBP18.8■□□□□ 0.6
SMC4-211ENST00000469858 CXCR3P49682 368 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 CAV1Q03135 178 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 GBE1Q04446 702 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 SCAPQ12770 1279 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 NCBP2-AS2Q69YL0 99 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 TMEM169Q96HH4 297 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 TKTL2Q9H0I9 626 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 MED4Q9NPJ6 270 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 ARHGEF4Q9NR80 690 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 ETNK2Q9NVF9 386 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 NUDT5Q9UKK9 219 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 PLAAQ9Y263 795 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 MFHAS1Q9Y4C4 1052 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 MRPL42Q9Y6G3 142 aaKnown RBP18.8■□□□□ 0.6
SMC4-211ENST00000469858 KIAA1671Q9BY89 1806 aa18.8■□□□□ 0.6
SMC4-211ENST00000469858 WDR27A2RRH5 827 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 EEF2KO00418 725 aaKnown RBP18.79■□□□□ 0.6
SMC4-211ENST00000469858 SYF2O95926 243 aaKnown RBP18.79■□□□□ 0.6
SMC4-211ENST00000469858 HAPLN1P10915 354 aaPredicted RBP18.79■□□□□ 0.6
SMC4-211ENST00000469858 PMS2P54278 862 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 DENND5BQ6ZUT9 1274 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 CMTR2Q8IYT2 770 aaKnown RBP18.79■□□□□ 0.6
SMC4-211ENST00000469858 YME1L1Q96TA2 773 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 SFMBT1Q9UHJ3 866 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 ALPK3Q96L96 1907 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 FAM72CH0Y354 149 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 DNALI1O14645 258 aaPredicted RBP18.79■□□□□ 0.6
SMC4-211ENST00000469858 IRAK2O43187 625 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 BAIAP3O94812 1187 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 IGLV3-25P01717 112 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 OR1D2P34982 312 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 CHKAP35790 457 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 NRLP54845 237 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 FAM72AQ5TYM5 149 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 SLC8B1Q6J4K2 584 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 FAM72DQ6L9T8 149 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 MON1AQ86VX9 555 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 FAM72BQ86X60 149 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 SLC39A11Q8N1S5 342 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 C2orf15Q8WU43 125 aaKnown RBP18.79■□□□□ 0.6
SMC4-211ENST00000469858 CASP10Q92851 521 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 ADAM7Q9H2U9 754 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 SMOC2Q9H3U7 446 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 IL23AQ9NPF7 189 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 OSER1Q9NX31 292 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 GMIPQ9P107 970 aa18.79■□□□□ 0.6
SMC4-211ENST00000469858 ZBBXA8MT70 800 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 MSI1O43347 362 aaKnown RBP18.78■□□□□ 0.6
SMC4-211ENST00000469858 SOD2P04179 222 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 CAPN2P17655 700 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 LAG3P18627 525 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 EN2P19622 333 aaPredicted RBP18.78■□□□□ 0.6
SMC4-211ENST00000469858 SLC10A2Q12908 348 aaPredicted RBP18.78■□□□□ 0.6
SMC4-211ENST00000469858 HIBCHQ6NVY1 386 aaPredicted RBP18.78■□□□□ 0.6
SMC4-211ENST00000469858 RFX8Q6ZV50 586 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 CCDC33Q8N5R6 958 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 COLGALT1Q8NBJ5 622 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 LRRN4Q8WUT4 740 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 FBXO32Q969P5 355 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 AAASQ9NRG9 546 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 DNAJC17Q9NVM6 304 aaKnown RBP18.78■□□□□ 0.6
SMC4-211ENST00000469858 BACE2Q9Y5Z0 518 aa18.78■□□□□ 0.6
SMC4-211ENST00000469858 KCNN4O15554 427 aa18.77■□□□□ 0.6
SMC4-211ENST00000469858 RTN3O95197 1032 aaPredicted RBP18.77■□□□□ 0.6
SMC4-211ENST00000469858 YWHAQP27348 245 aa18.77■□□□□ 0.6
SMC4-211ENST00000469858 STIP1P31948 543 aaKnown RBP18.77■□□□□ 0.6
SMC4-211ENST00000469858 RPL22P35268 128 aaKnown RBP18.77■□□□□ 0.6
SMC4-211ENST00000469858 NR2C2P49116 596 aa18.77■□□□□ 0.6
SMC4-211ENST00000469858 SLMAPQ14BN4 828 aa18.77■□□□□ 0.6
SMC4-211ENST00000469858 TAB3Q8N5C8 712 aaPredicted RBP18.77■□□□□ 0.6
SMC4-211ENST00000469858 PWWP2AQ96N64 755 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms