RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 TCRBV5S1A1TA0A578 114 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 TYW5A2RUC4 315 aaKnown RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 C2orf78A6NCI8 922 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 SOBPA7XYQ1 873 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 MDM4O15151 490 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 IRAK2O43187 625 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 MSI1O43347 362 aaKnown RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 BUB1BO60566 1050 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 PALMO75781 387 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 PROSCO94903 275 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 MOCS2O96007 188 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 OAS1P00973 400 aaKnown RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 KRT7P08729 469 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 ZDHHC11BP0C7U3 371 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 CCR1P32246 355 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 MAN1A1P33908 653 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 HADHBP55084 474 aaKnown RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 TBX4P57082 545 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 GNG11P61952 73 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 MTA1Q13330 715 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 NNTQ13423 1086 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 CBX2Q14781 532 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 TCEAL1Q15170 157 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 TRIP4Q15650 581 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 SLC5A9Q2M3M2 681 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 C15orf59Q2T9L4 293 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 CCDC14Q49A88 953 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 EFHC2Q5JST6 749 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 ZNF569Q5MCW4 686 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 SNX30Q5VWJ9 437 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 SYPL2Q5VXT5 272 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 NUGGCQ68CJ6 796 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 MSANTD2Q6P1R3 559 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 KLHDC10Q6PID8 442 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 BHLHA9Q7RTU4 235 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 UNC45BQ8IWX7 931 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 NIPA2Q8N8Q9 360 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 ARL14EPQ8N8R7 260 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 ATP6V0D2Q8N8Y2 350 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 SUSD6Q92537 303 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 PLD4Q96BZ4 506 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 ACSF2Q96CM8 615 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 TCEAL4Q96EI5 215 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 WDCPQ9H6R7 721 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 KIF9Q9HAQ2 790 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 IL21Q9HBE4 155 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 SCUBE2Q9NQ36 999 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 OSER1Q9NX31 292 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 SMPD4Q9NXE4 827 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 SFMBT1Q9UHJ3 866 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 TLR6Q9Y2C9 796 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 HBS1LQ9Y450 684 aaKnown RBP8.45□□□□□ -1.06
HDAC6-216ENST00000468949 PCDHGA4Q9Y5G9 962 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 CPQQ9Y646 472 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 DUSP10Q9Y6W6 482 aa8.45□□□□□ -1.06
HDAC6-216ENST00000468949 A0A0U1RQJ8 604 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 USP27XA6NNY8 438 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 KIF2AO00139 706 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-216ENST00000468949 PSTPIP1O43586 416 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 TBX18O95935 607 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 FTCDO95954 541 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 COMTP21964 271 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 PCK1P35558 622 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 CETN2P41208 172 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 CCR2P41597 374 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 SLC11A2P49281 568 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 DNA2P51530 1060 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 KRT81Q14533 505 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 PRSS36Q5K4E3 855 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 BRMS1LQ5PSV4 323 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 STXBP5Q5T5C0 1151 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 CC2D1AQ6P1N0 951 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-216ENST00000468949 OTOP3Q7RTS5 596 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 FAM131BQ86XD5 332 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 NPAS3Q8IXF0 933 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 RHOT1Q8IXI2 618 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 YAF2Q8IY57 180 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 CMTM8Q8IZV2 173 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 C17orf53Q8N3J3 647 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-216ENST00000468949 ZNF276Q8N554 614 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 TDRD5Q8NAT2 981 aaKnown RBP8.44□□□□□ -1.06
HDAC6-216ENST00000468949 ITFG1Q8TB96 612 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 ZSCAN18Q8TBC5 510 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-216ENST00000468949 ATRIPQ8WXE1 791 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 HSPH1Q92598 858 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 C16orf45Q96MC5 204 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-216ENST00000468949 NPY6RQ99463 290 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 DDX50Q9BQ39 737 aaKnown RBP8.44□□□□□ -1.06
HDAC6-216ENST00000468949 PHF7Q9BWX1 381 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-216ENST00000468949 LRRC3Q9BY71 257 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 TRIM7Q9C029 511 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 DCLK3Q9C098 648 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 ZWILCHQ9H900 591 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 SLC24A3Q9HC58 644 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 GDE1Q9NZC3 331 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 PCSK1NQ9UHG2 260 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 CDH7Q9ULB5 785 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 USP18Q9UMW8 372 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 NR2E1Q9Y466 385 aa8.44□□□□□ -1.06
HDAC6-216ENST00000468949 CAPN6Q9Y6Q1 641 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms