RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CHAC2Q8WUX2 184 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SDCCAG3Q96C92 435 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CMTM5Q96DZ9 223 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 HSPBAP1Q96EW2 488 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 PLEKHA8Q96JA3 519 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF641Q96N77 438 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 AIFM3Q96NN9 605 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ACAP3Q96P50 834 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 PPP1R10Q96QC0 940 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 KCNK16Q96T55 309 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SERPINI1Q99574 410 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MYD88Q99836 296 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TUBA1CQ9BQE3 449 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MXD3Q9BW11 206 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MRPL1Q9BYD6 325 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 INO80BQ9C086 356 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 WDR12Q9GZL7 423 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 NRSN2Q9GZP1 204 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SENP6Q9GZR1 1112 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 WWP1Q9H0M0 922 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 WNT8AQ9H1J5 351 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 EBF3Q9H4W6 596 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SOX17Q9H6I2 414 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 RMND5AQ9H871 391 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CABP5Q9NP86 173 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MRPL40Q9NQ50 206 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CASS4Q9NQ75 786 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SH3GLB2Q9NR46 395 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 FAM207AQ9NSI2 230 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 FAM105AQ9NUU6 356 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 DDX18Q9NVP1 670 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TNFRSF10DQ9UBN6 386 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ADGRE2Q9UHX3 823 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TAGLN3Q9UI15 199 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ATPIF1Q9UII2 106 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SLC8A2Q9UPR5 921 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ERGIC3Q9Y282 383 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ATP11BQ9Y2G3 1177 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 WBP11Q9Y2W2 641 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MSRB2Q9Y3D2 182 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 DAGLAQ9Y4D2 1042 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TIMM22Q9Y584 194 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MAD1L1Q9Y6D9 718 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CEPT1Q9Y6K0 416 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 COL22A1Q8NFW1 1626 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ATRNO75882 1429 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 LMO7Q8WWI1 1683 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 TEX51A0A1B0GUA7 166 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 GTPBP10A4D1E9 387 aaKnown RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 ANKRD34BA5PLL1 514 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 EIF4E1BA6NMX2 242 aaKnown RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 VWA5AO00534 786 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 HAT1O14929 419 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 ACOX3O15254 700 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 DYNC1LI2O43237 492 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 THAP12O43422 761 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 SNAP91O60641 907 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 KLHL41O60662 606 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 JRKO75564 520 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 SULT1C4O75897 302 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 DNAJB5O75953 348 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 FBXO21O94952 628 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 BAG2O95816 211 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 IFIT1P09914 478 aaKnown RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 TMEM253P0C7T8 217 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 SMIM18P0DKX4 95 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 HSPA1AP0DMV8 641 aaKnown RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 HSPA1BP0DMV9 641 aaKnown RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 CHRNB1P11230 501 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 UBL4AP11441 157 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 SLC5A2P31639 672 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 ATICP31939 592 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF132P52740 706 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 ANTXR2P58335 489 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 GNG2P59768 71 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 EIF4A1P60842 406 aaKnown RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 BNC1Q01954 994 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 FCHO2Q0JRZ9 810 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 GALNT1Q10472 559 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 DPYSQ14117 519 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 UBE3CQ15386 1083 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 CYTH1Q15438 398 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 MAPRE2Q15555 327 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 TAF1CQ15572 869 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 MSMPQ1L6U9 139 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 INSCQ1MX18 579 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 ZC2HC1CQ53FD0 456 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 HP1BP3Q5SSJ5 553 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 AGAP7PQ5VUJ5 663 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 IRAK1BP1Q5VVH5 260 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 ATG16L1Q676U5 607 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 SCARA3Q6AZY7 606 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 CGB2Q6NT52 195 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 ALKBH5Q6P6C2 394 aaKnown RBP5.02□□□□□ -1.61
SF3B1-207ENST00000468925 DCLRE1AQ6PJP8 1040 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 LVRNQ6Q4G3 990 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 SLC30A10Q6XR72 485 aa5.02□□□□□ -1.61
SF3B1-207ENST00000468925 IDO2Q6ZQW0 420 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms