RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 MIR1-1HGQ9H1L0 117 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 CCDC86Q9H6F5 360 aaKnown RBP13.74□□□□□ -0.21
PTPN7-207ENST00000468385 GAREM1Q9H706 876 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 CLIC5Q9NZA1 410 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 KIAA1522Q9P206 1035 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-207ENST00000468385 CLEC4EQ9ULY5 219 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 PCDHA7Q9UN72 937 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 APOBEC2Q9Y235 224 aaKnown RBP13.74□□□□□ -0.21
PTPN7-207ENST00000468385 FNDC3AQ9Y2H6 1198 aaKnown RBP13.74□□□□□ -0.21
PTPN7-207ENST00000468385 LOC400499M0QZD8 3231 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 NBEAQ8NFP9 2946 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 PDXKO00764 312 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 BCAT2O15382 392 aaPredicted RBP13.73□□□□□ -0.21
PTPN7-207ENST00000468385 CILPO75339 1184 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 HMBSP08397 361 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 RALAP11233 206 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 OXTRP30559 389 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 CORO1AP31146 461 aaKnown RBP13.73□□□□□ -0.21
PTPN7-207ENST00000468385 COG7P83436 770 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 EFEMP1Q12805 493 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 ZNF234Q14588 700 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 COL28A1Q2UY09 1125 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 KMT5BQ4FZB7 885 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 PPP1R26Q5T8A7 1209 aaPredicted RBP13.73□□□□□ -0.21
PTPN7-207ENST00000468385 RESP18Q5W5W9 173 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 TMEM215Q68D42 235 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 DBX2Q6ZNG2 339 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 ANKS1BQ7Z6G8 1248 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 C1orf216Q8TAB5 229 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 MDM1Q8TC05 714 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 SETD7Q8WTS6 366 aaKnown RBP13.73□□□□□ -0.21
PTPN7-207ENST00000468385 UCMAQ8WVF2 138 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 PRCCQ92733 491 aaPredicted RBP13.73□□□□□ -0.21
PTPN7-207ENST00000468385 DUSP16Q9BY84 665 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 CYP3A43Q9HB55 503 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 TM7SF3Q9NS93 570 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 ELOVL2Q9NXB9 296 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 TOR4AQ9NXH8 423 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 SERTAD1Q9UHV2 236 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 RASAL2Q9UJF2 1139 aa13.73□□□□□ -0.21
PTPN7-207ENST00000468385 AGO1Q9UL18 857 aaKnown RBP13.73□□□□□ -0.21
PTPN7-207ENST00000468385 K7ELQ4 463 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-207ENST00000468385 SYNCRIPO60506 623 aaKnown RBP13.72□□□□□ -0.21
PTPN7-207ENST00000468385 DKK1O94907 266 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 CER1O95813 267 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
PTPN7-207ENST00000468385 PRKCHP24723 683 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 MATKP42679 507 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 HLA-BQ31612 363 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 SOWAHCQ53LP3 525 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-207ENST00000468385 CEP135Q66GS9 1140 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 IL27RAQ6UWB1 636 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 TMPRSS7Q7RTY8 843 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 PDZD3Q86UT5 571 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 CACUL1Q86Y37 369 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 TAS1R2Q8TE23 839 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 SORCS1Q8WY21 1168 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 CDK5RAP1Q96SZ6 601 aaKnown RBP13.72□□□□□ -0.21
PTPN7-207ENST00000468385 NUP58Q9BVL2 599 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 EXOC1Q9NV70 894 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 EIF2B4Q9UI10 523 aaKnown RBP13.72□□□□□ -0.21
PTPN7-207ENST00000468385 SLCO1B1Q9Y6L6 691 aa13.72□□□□□ -0.21
PTPN7-207ENST00000468385 CKAP5Q14008 2032 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 ACTN4O43707 911 aaKnown RBP13.71□□□□□ -0.21
PTPN7-207ENST00000468385 KIF20AO95235 890 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 EPHX1P07099 455 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 SLFN14P0C7P3 912 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 ACADMP11310 421 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 CD58P19256 250 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 GCLMP48507 274 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 VAMP7P51809 220 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 PPP3CAQ08209 521 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 EIF4HQ15056 248 aaKnown RBP13.71□□□□□ -0.21
PTPN7-207ENST00000468385 FOXD4L6Q3SYB3 417 aaPredicted RBP13.71□□□□□ -0.21
PTPN7-207ENST00000468385 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
PTPN7-207ENST00000468385 FOXD4L3Q6VB84 417 aaPredicted RBP13.71□□□□□ -0.21
PTPN7-207ENST00000468385 DENND1CQ8IV53 801 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 FAM217AQ8IXS0 508 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 CEP57L1Q8IYX8 460 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 CPXM2Q8N436 756 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
PTPN7-207ENST00000468385 PAGE5Q96GU1 130 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 IMPG2Q9BZV3 1241 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 CIPCQ9C0C6 399 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 NIF3L1Q9GZT8 377 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 FRMD4BQ9Y2L6 1034 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 PCDHGB2Q9Y5G2 931 aa13.71□□□□□ -0.21
PTPN7-207ENST00000468385 ITPR1Q14643 2758 aa13.71□□□□□ -0.22
PTPN7-207ENST00000468385 PTPRBP23467 1997 aa13.71□□□□□ -0.22
PTPN7-207ENST00000468385 A0A1B0GVT2 93 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 MAPK13O15264 365 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 FLRT2O43155 660 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 CYBBP04839 570 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 ATXN1LP0C7T5 689 aaKnown RBP13.7□□□□□ -0.22
PTPN7-207ENST00000468385 TRIM49P0CI25 452 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 TRIM49CP0CI26 452 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 C7P10643 843 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 PDIA4P13667 645 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms