RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 DNPEPQ9ULA0 475 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 MFHAS1Q9Y4C4 1052 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 ZNF487B1APH4 448 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 H7C4K7 107 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 M0QYT0 321 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 TRIM66O15016 1216 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 PRPSAP2O60256 369 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 NCAM1P13591 858 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 KLRC2P26717 231 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 RDXP35241 583 aaKnown RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 YWHAGP61981 247 aaKnown RBP eCLIP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 DUSP4Q13115 394 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 DHX34Q14147 1143 aaKnown RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 PSMD5Q16401 504 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 ANKRD20A8PQ5CZ79 823 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 ZDHHC24Q6UX98 284 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 NPNTQ6UXI9 565 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 TAC4Q86UU9 113 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 NUP93Q8N1F7 819 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 AUTS2Q8WXX7 1259 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 RNF157Q96PX1 679 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 OXCT2Q9BYC2 517 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 CWC15Q9P013 229 aaKnown RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 FBXW11Q9UKB1 542 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 A0A1W2PQH9 124 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 ZDHHC11BP0C7U3 371 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 LAG3P18627 525 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 OR1D2P34982 312 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 CXCR3P49682 368 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 CDH6P55285 790 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 ARPP19P56211 112 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 SCAPQ12770 1279 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 SLC10A2Q12908 348 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 SMC1AQ14683 1233 aaKnown RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 CCDC92Q53HC0 331 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 SCYL2Q6P3W7 929 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 SCN4BQ8IWT1 228 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 SLC7A14Q8TBB6 771 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 DQX1Q8TE96 717 aaKnown RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 CASP10Q92851 521 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 ERP44Q9BS26 406 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 C10orf88Q9H8K7 445 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 C2CD2LO14523 706 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 MAP2K7O14733 419 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 DAPK3O43293 454 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 CST8O60676 142 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 TJP3O95049 919 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 DNAJB1P25685 340 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 RPL21P46778 160 aaKnown RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 PDK2Q15119 407 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 VPS37AQ8NEZ2 397 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 SPPL2BQ8TCT7 592 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 C2orf15Q8WU43 125 aaKnown RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 NKD2Q969F2 451 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-208ENST00000468300 PLVAPQ9BX97 442 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 ZBP1Q9H171 429 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 ETNK2Q9NVF9 386 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 SPG21Q9NZD8 308 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 AP4E1Q9UPM8 1137 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 DENND4CQ5VZ89 1909 aa8.58□□□□□ -1.04
BRCA1-208ENST00000468300 GOLGA6L10A0A0M3HER8 536 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 FAM187AA6NFU0 413 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 CPB1P15086 417 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 DRG2P55039 364 aaKnown RBP8.57□□□□□ -1.04
BRCA1-208ENST00000468300 GDF10P55107 478 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 SMARCB1Q12824 385 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 NME3Q13232 169 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 FAM182AQ5T1J6 154 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 TAX1BP1Q86VP1 789 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 HERC6Q8IVU3 1022 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 HAUS1Q96CS2 278 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 CSPG4P5Q96PW8 444 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 SLC9A7Q96T83 725 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 YME1L1Q96TA2 773 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 ZNF670Q9BS34 389 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 TTLL2Q9BWV7 592 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 SMOC2Q9H3U7 446 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 ARHGEF38Q9NXL2 777 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 GMIPQ9P107 970 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 MTUS1Q9ULD2 1270 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 NFU1Q9UMS0 254 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 ITM2BQ9Y287 266 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 SZT2Q5T011 3432 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 FGF18O76093 207 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 HMGA1P17096 107 aaKnown RBP8.57□□□□□ -1.04
BRCA1-208ENST00000468300 GOT1P17174 413 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 ADRA1BP35368 520 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 GLUD2P49448 558 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 DYNLT1P63172 113 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 OTUD4Q01804 1114 aaKnown RBP8.57□□□□□ -1.04
BRCA1-208ENST00000468300 DEUP1Q05D60 604 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 DPYSQ14117 519 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 MAATS1Q7Z4T9 603 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 PSTKQ8IV42 348 aaKnown RBP8.57□□□□□ -1.04
BRCA1-208ENST00000468300 EIF1ADQ8N9N8 165 aaKnown RBP8.57□□□□□ -1.04
BRCA1-208ENST00000468300 CCDC26Q8TAB7 109 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 ZNF461Q8TAF7 563 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 ACTL9Q8TC94 416 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 NTAN1Q96AB6 310 aa8.57□□□□□ -1.04
BRCA1-208ENST00000468300 CALN1Q9BXU9 219 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms