RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 EOGTQ5NDL2 527 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 EGFLAMQ63HQ2 1017 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 MSANTD2Q6P1R3 559 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 NUDT18Q6ZVK8 323 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.04□□□□□ -0.48
CDHR3-205ENST00000468143 TMEM110Q86TL2 294 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 KBTBD6Q86V97 674 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 FAM71AQ8IYT1 594 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 FAM160A2Q8N612 972 aaPredicted RBP12.04□□□□□ -0.48
CDHR3-205ENST00000468143 C1orf131Q8NDD1 294 aaKnown RBP12.04□□□□□ -0.48
CDHR3-205ENST00000468143 STK32AQ8WU08 396 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 GAB3Q8WWW8 586 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 PIWIL1Q96J94 861 aaKnown RBP12.04□□□□□ -0.48
CDHR3-205ENST00000468143 CPXM1Q96SM3 734 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 GMEB2Q9UKD1 530 aa12.04□□□□□ -0.48
CDHR3-205ENST00000468143 ZFHX2Q9C0A1 2572 aaPredicted RBP12.04□□□□□ -0.48
CDHR3-205ENST00000468143 CCDC163A0A0D9SF12 145 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 WASH3PC4AMC7 463 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 TPM2P07951 284 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 UCHL3P15374 230 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 MYL5Q02045 173 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 PDCLQ13371 301 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 GEN1Q17RS7 908 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 TAF3Q5VWG9 929 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 LAIR1Q6GTX8 287 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 RFWD3Q6PCD5 774 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 PGBD3Q8N328 593 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 CPXM2Q8N436 756 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 MDGA1Q8NFP4 955 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 DQX1Q8TE96 717 aaKnown RBP12.03□□□□□ -0.48
CDHR3-205ENST00000468143 TMA16Q96EY4 203 aaKnown RBP12.03□□□□□ -0.48
CDHR3-205ENST00000468143 PPP1R13BQ96KQ4 1090 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 NAA15Q9BXJ9 866 aaKnown RBP12.03□□□□□ -0.48
CDHR3-205ENST00000468143 PDCL3Q9H2J4 239 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 EBF1Q9UH73 591 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 FBXO10Q9UK96 956 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 PCDHGC3Q9UN70 934 aa12.03□□□□□ -0.48
CDHR3-205ENST00000468143 TCRBV21S2A2A0A5A6 115 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 SART1O43290 800 aaKnown RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 GRAP2O75791 330 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 MOCS2O96007 188 aaPredicted RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 ERBB2P04626 1255 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 CDK11BP21127 795 aaKnown RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 SLC6A4P31645 630 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 GBP1P32455 592 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 SGSHP51688 502 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 COPB1P53618 953 aaKnown RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 YWHAZP63104 245 aaKnown RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 PITX1P78337 314 aaPredicted RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 TYRO3Q06418 890 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 CCDC6Q16204 474 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 MEA1Q16626 185 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 HSF5Q4G112 596 aaPredicted RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 MPPE1Q53F39 396 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 FKBP15Q5T1M5 1219 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 ADGRF1Q5T601 910 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 OR6B2Q6IFH4 312 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 CAVIN1Q6NZI2 390 aaKnown RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 CACNA2D4Q7Z3S7 1137 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 TAC4Q86UU9 113 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 UNC45BQ8IWX7 931 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 FAM217AQ8IXS0 508 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 CHPFQ8IZ52 775 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 DEFB106AQ8N104 65 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 FRMD1Q8N878 549 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 HMGB4Q8WW32 186 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 RLN3Q8WXF3 142 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 FCRL2Q96LA5 508 aaPredicted RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 PCMTD1Q96MG8 357 aaPredicted RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 LHX5Q9H2C1 402 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 POPDC2Q9HBU9 364 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 PARD6AQ9NPB6 346 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 NLRC4Q9NPP4 1024 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 FAM207AQ9NSI2 230 aaPredicted RBP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 CACNA2D2Q9NY47 1150 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 BCCIPQ9P287 314 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDHR3-205ENST00000468143 USP18Q9UMW8 372 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 STARD13Q9Y3M8 1113 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 RAD54BQ9Y620 910 aa12.02□□□□□ -0.49
CDHR3-205ENST00000468143 SYNJ2BP-COX16A0A087WUM0 186 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 EPHB6O15197 1021 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 ACSL4O60488 711 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 ALDH1A2O94788 518 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 IGLV3-27P01718 113 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 RETP07949 1114 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 HOXB2P14652 356 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 CYP11B1P15538 503 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 HOXD9P28356 352 aaPredicted RBP12.01□□□□□ -0.49
CDHR3-205ENST00000468143 NTSR1P30989 418 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 SLC11A2P49281 568 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 BPIFB4P59827 614 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 POLR2FP61218 127 aaKnown RBP12.01□□□□□ -0.49
CDHR3-205ENST00000468143 NCAPHQ15003 741 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 ANO6Q4KMQ2 910 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 USP39Q53GS9 565 aaKnown RBP12.01□□□□□ -0.49
CDHR3-205ENST00000468143 DCAF6Q58WW2 860 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 ZC3H12AQ5D1E8 599 aaKnown RBP12.01□□□□□ -0.49
CDHR3-205ENST00000468143 NUGGCQ68CJ6 796 aa12.01□□□□□ -0.49
CDHR3-205ENST00000468143 NADSYN1Q6IA69 706 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms