RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 DMC1Q14565 340 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 PREPLQ4J6C6 727 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-215ENST00000468018 RNF43Q68DV7 783 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 CAVIN1Q6NZI2 390 aaKnown RBP15.82■□□□□ 0.12
ATG4B-215ENST00000468018 DHX40Q8IX18 779 aaKnown RBP15.82■□□□□ 0.12
ATG4B-215ENST00000468018 IL17RCQ8NAC3 791 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 DQX1Q8TE96 717 aaKnown RBP15.82■□□□□ 0.12
ATG4B-215ENST00000468018 AZIN2Q96A70 460 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 SLC39A13Q96H72 371 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 XPO6Q96QU8 1125 aaKnown RBP15.82■□□□□ 0.12
ATG4B-215ENST00000468018 ERGIC2Q96RQ1 377 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 ASNSD1Q9NWL6 643 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 EBF1Q9UH73 591 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 SLC27A6Q9Y2P4 619 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 NUP205Q92621 2012 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 ABCA7Q8IZY2 2146 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 CFAP54Q96N23 3096 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 PES1O00541 588 aaKnown RBP15.81■□□□□ 0.12
ATG4B-215ENST00000468018 HRO43593 1189 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 ADAM23O75077 832 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 GLI1P08151 1106 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 HNRNPLP14866 589 aaKnown RBP eCLIP15.81■□□□□ 0.12
ATG4B-215ENST00000468018 RAPGEF1Q13905 1077 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 CRY1Q16526 586 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 PTPN20Q4JDL3 420 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 ANO6Q4KMQ2 910 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 C2orf27AQ580R0 203 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 EMC10Q5UCC4 262 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 SYPL2Q5VXT5 272 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 GRAMD4Q6IC98 578 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 TOGARAM2Q6ZUX3 1019 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 SDK1Q7Z5N4 2213 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 RASSF3Q86WH2 238 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 C1orf131Q8NDD1 294 aaKnown RBP15.81■□□□□ 0.12
ATG4B-215ENST00000468018 CEP192Q8TEP8 1941 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 PPP1R13BQ96KQ4 1090 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 FCRL2Q96LA5 508 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-215ENST00000468018 IRX2Q9BZI1 471 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-215ENST00000468018 POPDC2Q9HBU9 364 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 DNAJC17Q9NVM6 304 aaKnown RBP15.81■□□□□ 0.12
ATG4B-215ENST00000468018 PLK2Q9NYY3 685 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 SLC8A2Q9UPR5 921 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 NAALADL1Q9UQQ1 740 aa15.81■□□□□ 0.12
ATG4B-215ENST00000468018 PRRT4C9JH25 899 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 NCAM1P13591 858 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 ATP1A3P13637 1013 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 HARS2P49590 506 aaKnown RBP15.8■□□□□ 0.12
ATG4B-215ENST00000468018 SEC13P55735 322 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 ZNF445P59923 1031 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 FKBP15Q5T1M5 1219 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 ADGRF1Q5T601 910 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 NUGGCQ68CJ6 796 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 OLFML1Q6UWY5 402 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 TMEM92Q6UXU6 159 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 NOP9Q86U38 636 aaKnown RBP15.8■□□□□ 0.12
ATG4B-215ENST00000468018 TAC4Q86UU9 113 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 PASD1Q8IV76 773 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 ALLCQ8N6M5 410 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 AOPEPQ8N6M6 819 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 ZNF397Q8NF99 534 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-215ENST00000468018 EPS8L1Q8TE68 723 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 GOLGA1Q92805 767 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 FAM149B1Q96BN6 582 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 SERPINB11Q96P15 392 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 SLC2A13Q96QE2 648 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 HHIPQ96QV1 700 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 TRIM62Q9BVG3 475 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 CD248Q9HCU0 757 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 CLEC4EQ9ULY5 219 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 SMG5Q9UPR3 1016 aaKnown RBP15.8■□□□□ 0.12
ATG4B-215ENST00000468018 TLR6Q9Y2C9 796 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 THADAQ6YHU6 1953 aa15.8■□□□□ 0.12
ATG4B-215ENST00000468018 TNRC6BQ9UPQ9 1833 aaKnown RBP15.8■□□□□ 0.12
ATG4B-215ENST00000468018 DOCK4Q8N1I0 1966 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 TBC1D3BA6NDS4 549 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 SGK1O00141 431 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 ERBB2P04626 1255 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 TPM2P07951 284 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 HOXD9P28356 352 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-215ENST00000468018 KRT9P35527 623 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 GABRB2P47870 512 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 DGKGP49619 791 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 YWHAZP63104 245 aaKnown RBP15.79■□□□□ 0.12
ATG4B-215ENST00000468018 SYCP1Q15431 976 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 TAF5Q15542 800 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 FAM133BQ5BKY9 247 aaKnown RBP15.79■□□□□ 0.12
ATG4B-215ENST00000468018 C10orf76Q5T2E6 689 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 UNC45BQ8IWX7 931 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 TXNDC5Q8NBS9 432 aaKnown RBP15.79■□□□□ 0.12
ATG4B-215ENST00000468018 ANKRD20A12PQ8NF67 263 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 NOX5Q96PH1 765 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 SLC2A11Q9BYW1 496 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 NAT10Q9H0A0 1025 aaKnown RBP15.79■□□□□ 0.12
ATG4B-215ENST00000468018 NOCTQ9UK39 431 aaKnown RBP15.79■□□□□ 0.12
ATG4B-215ENST00000468018 ZNF292O60281 2723 aa15.79■□□□□ 0.12
ATG4B-215ENST00000468018 IRAK2O43187 625 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 KLF8O95600 359 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-215ENST00000468018 APBB3O95704 486 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 SLC6A4P31645 630 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 TIE1P35590 1138 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms