RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 FGF14Q92915 247 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 NXPE3Q969Y0 559 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 ELSPBP1Q96BH3 223 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 PLD4Q96BZ4 506 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 RSPRY1Q96DX4 576 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 OSGEPQ9NPF4 335 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 CFAP97Q9P2B7 532 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 IP6K2Q9UHH9 426 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 LCMT1Q9UIC8 334 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 TFR2Q9UP52 801 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 SH3BP1Q9Y3L3 701 aa17.78■□□□□ 0.44
VARS2-204ENST00000467717 C2orf16Q68DN1 1984 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 SYNJ2BP-COX16A0A087WUM0 186 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 HEPACAM2A8MVW5 462 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 BTNL10A8MVZ5 291 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 STC2O76061 302 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 IGLV3-27P01718 113 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 HMBSP08397 361 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 IRF1P10914 325 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 SLC2A3P11169 496 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 HARS2P49590 506 aaKnown RBP17.77■□□□□ 0.44
VARS2-204ENST00000467717 ZP2Q05996 745 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 DEUP1Q05D60 604 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 USP4Q13107 963 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 CDO1Q16878 200 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 C15orf59Q2T9L4 293 aaPredicted RBP17.77■□□□□ 0.44
VARS2-204ENST00000467717 NUGGCQ68CJ6 796 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 SND1Q7KZF4 910 aaKnown RBP eCLIP17.77■□□□□ 0.44
VARS2-204ENST00000467717 KIAA1958Q8N8K9 716 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 TTC16Q8NEE8 873 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 ST13P5Q8NFI4 369 aaPredicted RBP17.77■□□□□ 0.44
VARS2-204ENST00000467717 BPIFB1Q8TDL5 484 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 FAM172AQ8WUF8 416 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 SLC39A13Q96H72 371 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 NECAB3Q96P71 396 aaPredicted RBP17.77■□□□□ 0.44
VARS2-204ENST00000467717 ADAM33Q9BZ11 813 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 DCLK3Q9C098 648 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 LACRTQ9GZZ8 138 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.77■□□□□ 0.44
VARS2-204ENST00000467717 COX16Q9P0S2 106 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 CALCOCO1Q9P1Z2 691 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 LIMD1Q9UGP4 676 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 LSM7Q9UK45 103 aaKnown RBP17.77■□□□□ 0.44
VARS2-204ENST00000467717 PAXBP1Q9Y5B6 917 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 NUMBLQ9Y6R0 609 aa17.77■□□□□ 0.44
VARS2-204ENST00000467717 E2F8A0AVK6 867 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 CCP110O43303 1012 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 CCR1P32246 355 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 NOP2P46087 812 aaKnown RBP17.76■□□□□ 0.43
VARS2-204ENST00000467717 CXCR3P49682 368 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 HDAC4P56524 1084 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 ZNF252P-AS1Q0IIN9 211 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 PIGHQ14442 188 aaPredicted RBP17.76■□□□□ 0.43
VARS2-204ENST00000467717 PPP2R5DQ14738 602 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 ACAP1Q15027 740 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 ZC3H12AQ5D1E8 599 aaKnown RBP17.76■□□□□ 0.43
VARS2-204ENST00000467717 SH3PXD2AQ5TCZ1 1133 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 HTR3DQ70Z44 454 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 MFSD6LQ8IWD5 586 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 UNC45BQ8IWX7 931 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 DEPDC1BQ8WUY9 529 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 RNF34Q969K3 372 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 BTBD6Q96KE9 485 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 CALR3Q96L12 384 aaKnown RBP17.76■□□□□ 0.43
VARS2-204ENST00000467717 FCRL2Q96LA5 508 aaPredicted RBP17.76■□□□□ 0.43
VARS2-204ENST00000467717 LRRC3BQ96PB8 259 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 NCAPGQ9BPX3 1015 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 KXD1Q9BQD3 176 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 TSGA10Q9BZW7 698 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 KCNK12Q9HB15 430 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 PIGVQ9NUD9 493 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 IGSF9Q9P2J2 1179 aa17.76■□□□□ 0.43
VARS2-204ENST00000467717 GREM1O60565 184 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 PROSCO94903 275 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 APOEP02649 317 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 PSMC3P17980 439 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 ARHGAP25P42331 645 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 HADHBP55084 474 aaKnown RBP17.75■□□□□ 0.43
VARS2-204ENST00000467717 FCHO2Q0JRZ9 810 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 MTA1Q13330 715 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 CC2D1AQ6P1N0 951 aaPredicted RBP17.75■□□□□ 0.43
VARS2-204ENST00000467717 VITQ6UXI7 678 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 ZNF662Q6ZS27 426 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 NIPA2Q8N8Q9 360 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 RIN3Q8TB24 985 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 WBP2Q969T9 261 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 RPP25Q9BUL9 199 aaKnown RBP17.75■□□□□ 0.43
VARS2-204ENST00000467717 WDCPQ9H6R7 721 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 THG1LQ9NWX6 298 aaKnown RBP17.75■□□□□ 0.43
VARS2-204ENST00000467717 ZNF510Q9Y2H8 683 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 PPP2R2CQ9Y2T4 447 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 DUSP10Q9Y6W6 482 aa17.75■□□□□ 0.43
VARS2-204ENST00000467717 ZNF638Q14966 1978 aaKnown RBP17.75■□□□□ 0.43
VARS2-204ENST00000467717 C19orf67A6NJJ6 358 aa17.74■□□□□ 0.43
VARS2-204ENST00000467717 KCNU1A8MYU2 1149 aa17.74■□□□□ 0.43
VARS2-204ENST00000467717 SLC9A3R1O14745 358 aaPredicted RBP17.74■□□□□ 0.43
VARS2-204ENST00000467717 RNF8O76064 485 aa17.74■□□□□ 0.43
VARS2-204ENST00000467717 KLKB1P03952 638 aa17.74■□□□□ 0.43
VARS2-204ENST00000467717 CORO1AP31146 461 aaKnown RBP17.74■□□□□ 0.43
VARS2-204ENST00000467717 ATXN1P54253 815 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms