RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 NLRC4Q9NPP4 1024 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 CDC23Q9UJX2 597 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 ZNF580Q9UK33 172 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 WDR17Q8IZU2 1322 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 SERPINB3P29508 390 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 CCKBRP32239 447 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 MMP13P45452 471 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 DGKQP52824 942 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 LINC00205P59089 165 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 NSUN2Q08J23 767 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMC4-207ENST00000467263 ATP1A4Q13733 1029 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 ZNF268Q14587 947 aaPredicted RBP4.88□□□□□ -1.63
SMC4-207ENST00000467263 SEC23BQ15437 767 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 RAB30Q15771 203 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 C4orf46Q504U0 113 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 VSTM1Q6UX27 236 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 IPO4Q8TEX9 1081 aaKnown RBP4.88□□□□□ -1.63
SMC4-207ENST00000467263 PNISRQ8TF01 805 aaKnown RBP4.88□□□□□ -1.63
SMC4-207ENST00000467263 ADGRE3Q9BY15 652 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 EPS8L2Q9H6S3 715 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 TMEM8AQ9HCN3 771 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 GAR1Q9NY12 217 aaKnown RBP4.88□□□□□ -1.63
SMC4-207ENST00000467263 SLC39A10Q9ULF5 831 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 FZD4Q9ULV1 537 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 LRP12Q9Y561 859 aa4.88□□□□□ -1.63
SMC4-207ENST00000467263 OR2W5A6NFC9 320 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 J3KTA2 159 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 PLA2G6O60733 806 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 RNF8O76064 485 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 ALADP13716 330 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 JAK3P52333 1124 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 KPNB1Q14974 876 aaKnown RBP4.87□□□□□ -1.63
SMC4-207ENST00000467263 FAM90A2PQ658T7 463 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 PIK3AP1Q6ZUJ8 805 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 RASGRP3Q8IV61 690 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 SYTL1Q8IYJ3 562 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 C16orf71Q8IYS4 520 aaPredicted RBP4.87□□□□□ -1.63
SMC4-207ENST00000467263 OSR1Q8TAX0 266 aaPredicted RBP4.87□□□□□ -1.63
SMC4-207ENST00000467263 MUL1Q969V5 352 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 STK33Q9BYT3 514 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 NECTIN3Q9NQS3 549 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 TUBA8Q9NY65 449 aaPredicted RBP4.87□□□□□ -1.63
SMC4-207ENST00000467263 SCAF8Q9UPN6 1271 aaKnown RBP4.87□□□□□ -1.63
SMC4-207ENST00000467263 AFG3L2Q9Y4W6 797 aa4.87□□□□□ -1.63
SMC4-207ENST00000467263 CYP2D7A0A087X1C5 515 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 CCDC194A0A1B0GVG4 234 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 HNRNPDLO14979 420 aaKnown RBP4.86□□□□□ -1.63
SMC4-207ENST00000467263 PIP5K1BO14986 540 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 PPM1AP35813 382 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 GSTM5P46439 218 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 WDR5P61964 334 aaKnown RBP4.86□□□□□ -1.63
SMC4-207ENST00000467263 SEMA3BQ13214 749 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 DGKKQ5KSL6 1271 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 TMEM63BQ5T3F8 832 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 CCDC144NLQ6NUI1 221 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 TLDC1Q6P9B6 456 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 ZNF813Q6ZN06 617 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 MORC1Q86VD1 984 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 SAMD14Q8IZD0 417 aaPredicted RBP4.86□□□□□ -1.63
SMC4-207ENST00000467263 CLASRPQ8N2M8 674 aaKnown RBP4.86□□□□□ -1.63
SMC4-207ENST00000467263 NRACQ8N912 160 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 HIC2Q96JB3 615 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 EIF3CQ99613 913 aaKnown RBP4.86□□□□□ -1.63
SMC4-207ENST00000467263 ARFGAP3Q9NP61 516 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 FSCN3Q9NQT6 498 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 TM7SF3Q9NS93 570 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 ABHD10Q9NUJ1 306 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 IGSF9Q9P2J2 1179 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 DTNAQ9Y4J8 743 aa4.86□□□□□ -1.63
SMC4-207ENST00000467263 CCDC187A0A096LP49 1063 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 PNMA6EA0A0J9YXQ4 647 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 FCHO1O14526 889 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 DSCR3O14972 297 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 BCAR3O75815 825 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 IGHMBP2P38935 993 aaKnown RBP4.85□□□□□ -1.63
SMC4-207ENST00000467263 YPEL5P62699 121 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 BTKQ06187 659 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 GAB1Q13480 694 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 STARD3Q14849 445 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 ELF2Q15723 593 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 PFKFB3Q16875 520 aaPredicted RBP4.85□□□□□ -1.63
SMC4-207ENST00000467263 GGT6Q6P531 493 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 IRF2BP2Q7Z5L9 587 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 ZNF398Q8TD17 642 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 MAP4K1Q92918 833 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 FAM118BQ9BPY3 351 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 NUAK2Q9H093 628 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 ARL8BQ9NVJ2 186 aa4.85□□□□□ -1.63
SMC4-207ENST00000467263 MAGED2Q9UNF1 606 aaPredicted RBP4.85□□□□□ -1.63
SMC4-207ENST00000467263 HEMK1Q9Y5R4 338 aaPredicted RBP4.85□□□□□ -1.63
SMC4-207ENST00000467263 C16orf96A6NNT2 1141 aa4.84□□□□□ -1.63
SMC4-207ENST00000467263 M0QZQ0 153 aa4.84□□□□□ -1.63
SMC4-207ENST00000467263 PCDH17O14917 1159 aa4.84□□□□□ -1.63
SMC4-207ENST00000467263 CTIFO43310 598 aaKnown RBP4.84□□□□□ -1.63
SMC4-207ENST00000467263 DHHO43323 396 aa4.84□□□□□ -1.63
SMC4-207ENST00000467263 TAF5LO75529 589 aa4.84□□□□□ -1.63
SMC4-207ENST00000467263 ATP5F1P24539 256 aaPredicted RBP4.84□□□□□ -1.63
SMC4-207ENST00000467263 TECP42680 631 aa4.84□□□□□ -1.63
SMC4-207ENST00000467263 VPS41P49754 854 aa4.84□□□□□ -1.63
SMC4-207ENST00000467263 HDAC1Q13547 482 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms