RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 SLC12A6Q9UHW9 1150 aa12.6□□□□□ -0.39
VPS16-206ENST00000466415 DNMT3LQ9UJW3 386 aa12.6□□□□□ -0.39
VPS16-206ENST00000466415 TLR6Q9Y2C9 796 aa12.6□□□□□ -0.39
VPS16-206ENST00000466415 TADA3O75528 432 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 FGF19O95750 216 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 MOCS2O96007 188 aaPredicted RBP12.59□□□□□ -0.39
VPS16-206ENST00000466415 HMBSP08397 361 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 CD48P09326 243 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 HNRNPA1P09651 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
VPS16-206ENST00000466415 MYL4P12829 197 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 KRT10P13645 584 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 HOXA9P31269 272 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 ADRA1BP35368 520 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 CDKN2BP42772 138 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 NRIP1P48552 1158 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 RGS19P49795 217 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 TUBP50607 506 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 ITIH3Q06033 890 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 SCAPQ12770 1279 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 TFDP2Q14188 446 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 DPYSL3Q14195 570 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 PPP2R5DQ14738 602 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 CA9Q16790 459 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 VSIG1Q86XK7 387 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 ATP6V0D2Q8N8Y2 350 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 LRRN4CLQ8ND94 238 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 SLC22A17Q8WUG5 538 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 UBXN4Q92575 508 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 MRPL38Q96DV4 380 aaKnown RBP12.59□□□□□ -0.39
VPS16-206ENST00000466415 KCTD15Q96SI1 283 aaPredicted RBP12.59□□□□□ -0.39
VPS16-206ENST00000466415 CDCA3Q99618 268 aaPredicted RBP12.59□□□□□ -0.39
VPS16-206ENST00000466415 EPAS1Q99814 870 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 RBM12Q9NTZ6 932 aaKnown RBP12.59□□□□□ -0.39
VPS16-206ENST00000466415 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.39
VPS16-206ENST00000466415 ZDHHC7Q9NXF8 308 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 HBS1LQ9Y450 684 aaKnown RBP12.59□□□□□ -0.39
VPS16-206ENST00000466415 HCFC2Q9Y5Z7 792 aa12.59□□□□□ -0.39
VPS16-206ENST00000466415 EPOPA6NHQ4 379 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 C3orf70A6NLC5 250 aaPredicted RBP12.58□□□□□ -0.4
VPS16-206ENST00000466415 ZNF487B1APH4 448 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 EEF2KO00418 725 aaKnown RBP12.58□□□□□ -0.4
VPS16-206ENST00000466415 DAPK3O43293 454 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 CREB3O43889 395 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 PHF2O75151 1096 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 RFPL2O75678 378 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 TBX18O95935 607 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 SRGAP2BP0DMP2 458 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 MBL2P11226 248 aaPredicted RBP12.58□□□□□ -0.4
VPS16-206ENST00000466415 L1CAMP32004 1257 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 ARSEP51690 589 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 ZNF135P52742 658 aaPredicted RBP12.58□□□□□ -0.4
VPS16-206ENST00000466415 TPI1P60174 286 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 DYNLT1P63172 113 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 MMRN1Q13201 1228 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 MTA1Q13330 715 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 DUSP6Q16828 381 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 ARHGAP15Q53QZ3 475 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 NUGGCQ68CJ6 796 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 C8orf74Q6P047 294 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 KLHDC10Q6PID8 442 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 PDZD4Q76G19 769 aaPredicted RBP12.58□□□□□ -0.4
VPS16-206ENST00000466415 KLHL7Q8IXQ5 586 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 HS6ST3Q8IZP7 471 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 ZNF276Q8N554 614 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 LEMD2Q8NC56 503 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 RUNDC3BQ96NL0 473 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 KRT12Q99456 494 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 ATXN3LQ9H3M9 355 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 HOMER3Q9NSC5 361 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 ARHGEF38Q9NXL2 777 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 RCOR3Q9P2K3 495 aaPredicted RBP12.58□□□□□ -0.4
VPS16-206ENST00000466415 EFR3BQ9Y2G0 817 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 GREB1Q4ZG55 1949 aa12.58□□□□□ -0.4
VPS16-206ENST00000466415 UQCRHLA0A096LP55 91 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 RFXAPO00287 272 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 APOL1O14791 398 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 COCHO43405 550 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 CST8O60676 142 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 F11P03951 625 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 UQCRHP07919 91 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 ZFXP17010 805 aaPredicted RBP12.57□□□□□ -0.4
VPS16-206ENST00000466415 PTPN2P17706 415 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 COG7P83436 770 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 CYP4F8P98187 520 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 RING1Q06587 406 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 TAZQ16635 292 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 ANKRD20A8PQ5CZ79 823 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 ZNF697Q5TEC3 545 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 TMC8Q8IU68 726 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 UNC45BQ8IWX7 931 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 PYROXD2Q8N2H3 581 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 MMGT1Q8N4V1 131 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 TTC13Q8NBP0 860 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 FAM71BQ8TC56 605 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 MAGOHBQ96A72 148 aaKnown RBP12.57□□□□□ -0.4
VPS16-206ENST00000466415 PLD4Q96BZ4 506 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 HAUS1Q96CS2 278 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 FCRL2Q96LA5 508 aaPredicted RBP12.57□□□□□ -0.4
VPS16-206ENST00000466415 RNF157Q96PX1 679 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 HAPLN3Q96S86 360 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms