RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 CMTM8Q8IZV2 173 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 CELF5Q8N6W0 485 aaKnown RBP9.94□□□□□ -0.82
ATG3-203ENST00000465980 RIN3Q8TB24 985 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 KIAA1524Q8TCG1 905 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 MYLPFQ96A32 169 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 ELMO3Q96BJ8 720 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 IMPG2Q9BZV3 1241 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 SNX25Q9H3E2 840 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 SEMA4AQ9H3S1 761 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 C8orf33Q9H7E9 229 aaPredicted RBP9.94□□□□□ -0.82
ATG3-203ENST00000465980 ABCB6Q9NP58 842 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 UBE2TQ9NPD8 197 aaPredicted RBP9.94□□□□□ -0.82
ATG3-203ENST00000465980 CRTAC1Q9NQ79 661 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 PRMT8Q9NR22 394 aaPredicted RBP9.94□□□□□ -0.82
ATG3-203ENST00000465980 GKN1Q9NS71 199 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 DNAAF2Q9NVR5 837 aaKnown RBP9.94□□□□□ -0.82
ATG3-203ENST00000465980 PYCARDQ9ULZ3 195 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 PCDHGC4Q9Y5F7 938 aa9.94□□□□□ -0.82
ATG3-203ENST00000465980 F8VZ95 297 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 GABRDO14764 452 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 STAU1O95793 577 aaKnown RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 SERPING1P05155 500 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 CKMP06732 381 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 CHRNB1P11230 501 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 ARSAP15289 507 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 FERP16591 822 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 WARSP23381 471 aaKnown RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 ATICP31939 592 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 SOX5P35711 763 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 PRKCIP41743 596 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 MYL6P60660 151 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 TNNC1P63316 161 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 NOP14P78316 857 aaKnown RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 SATB1Q01826 763 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 DRAP1Q14919 205 aaPredicted RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 LPAL2Q16609 132 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 ARHGAP44Q17R89 818 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 ITPRIPL2Q3MIP1 535 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 HGSNATQ68CP4 663 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 RAD9BQ6WBX8 426 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 SCARA5Q6ZMJ2 495 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 C4orf50Q6ZRC1 276 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 IRF2BP2Q7Z5L9 587 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 PPM1KQ8N3J5 372 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 SUMF1Q8NBK3 374 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 SPATA18Q8TC71 538 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 SHC3Q92529 594 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 RUBCNQ92622 972 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 USP13Q92995 863 aaPredicted RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 JAKMIP2Q96AA8 810 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 FAXDC2Q96IV6 333 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 BTBD6Q96KE9 485 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 KREMEN1Q96MU8 473 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 SLC22A12Q96S37 553 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 CHP1Q99653 195 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 MRPL45Q9BRJ2 306 aaKnown RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 XYLT2Q9H1B5 865 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 EBF3Q9H4W6 596 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 VRTNQ9H8Y1 702 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 APOBEC3GQ9HC16 384 aaKnown RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 TDP1Q9NUW8 608 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 THG1LQ9NWX6 298 aaKnown RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 ZSCAN32Q9NX65 697 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 OBP2AQ9NY56 170 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 NOP53Q9NZM5 478 aaKnown RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 ARHGAP20Q9P2F6 1191 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 NCDNQ9UBB6 729 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 UXTQ9UBK9 157 aaPredicted RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 CDH9Q9ULB4 789 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 SMG5Q9UPR3 1016 aaKnown RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 PCDHGA2Q9Y5H1 932 aa9.93□□□□□ -0.82
ATG3-203ENST00000465980 BZW2Q9Y6E2 419 aaKnown RBP9.93□□□□□ -0.82
ATG3-203ENST00000465980 ABCA7Q8IZY2 2146 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 SSU72P8A0A1W2PR75 194 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 SOWAHDA6NJG2 315 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 FOXN3O00409 490 aaPredicted RBP9.92□□□□□ -0.82
ATG3-203ENST00000465980 CCDC172P0C7W6 258 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 TBXAS1P24557 533 aaPredicted RBP9.92□□□□□ -0.82
ATG3-203ENST00000465980 MSNP26038 577 aaKnown RBP9.92□□□□□ -0.82
ATG3-203ENST00000465980 HOXC13P31276 330 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 GRIK1P39086 918 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 MAGEA11P43364 429 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 PLA2G4AP47712 749 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 RAP1GAPP47736 663 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 CXCL12P48061 93 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 DGKGP49619 791 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 CCR3P51677 355 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 DMWDQ09019 674 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 CUL2Q13617 745 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 LRRC32Q14392 662 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 ZNF699Q32M78 642 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 WDR72Q3MJ13 1102 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 CFAP221Q4G0U5 840 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 NAIF1Q69YI7 327 aaPredicted RBP9.92□□□□□ -0.82
ATG3-203ENST00000465980 HEATR6Q6AI08 1181 aaKnown RBP9.92□□□□□ -0.82
ATG3-203ENST00000465980 SPOPLQ6IQ16 392 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 CC2D1AQ6P1N0 951 aaPredicted RBP9.92□□□□□ -0.82
ATG3-203ENST00000465980 FAM171BQ6P995 826 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 LIMS2Q7Z4I7 341 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 MON1AQ86VX9 555 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms