RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 COL4A3Q01955 1670 aa4.41□□□□□ -1.7
SAMM50-202ENST00000465768 ARHGEF5Q12774 1597 aa4.4□□□□□ -1.7
SAMM50-202ENST00000465768 FGD6Q6ZV73 1430 aa4.4□□□□□ -1.7
SAMM50-202ENST00000465768 PNMA6EA0A0J9YXQ4 647 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 IPO5O00410 1097 aaKnown RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 SPRY2O43597 315 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 PMPCBO75439 489 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 TAF5LO75529 589 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 ACTL6BO94805 426 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 LMNAP02545 664 aaKnown RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 DLDP09622 509 aaKnown RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 DHRS4L1P0CG22 281 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 TMEM225BP0DP42 221 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 JUPP14923 745 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 KLRK1P26718 216 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 RENBPP51606 427 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 DGKQP52824 942 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 HSPA2P54652 639 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 SUMO2P61956 95 aaKnown RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 E2F1Q01094 437 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 FOXI1Q12951 378 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 CSHL1Q14406 222 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 GRM4Q14833 912 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 AASDHQ4L235 1098 aaPredicted RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 HECTD2Q5U5R9 776 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 ANKRD16Q6P6B7 361 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 MTHFD1LQ6UB35 978 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 DPY19L3Q6ZPD9 716 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 VRK3Q8IV63 474 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 SLC44A2Q8IWA5 706 aaPredicted RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 CLASRPQ8N2M8 674 aaKnown RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 LRRC71Q8N4P6 559 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 CAVIN3Q969G5 261 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 TBC1D20Q96BZ9 403 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 GCC1Q96CN9 775 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 ZG16BQ96DA0 208 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 PDLIM2Q96JY6 352 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 PAAF1Q9BRP4 392 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 DDX23Q9BUQ8 820 aaKnown RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 DPCDQ9BVM2 203 aaPredicted RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 FSD1LQ9BXM9 530 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 PABPC3Q9H361 631 aaKnown RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 EPS8L2Q9H6S3 715 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 FOXJ2Q9P0K8 574 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 LRIT1Q9P2V4 623 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 NFU1Q9UMS0 254 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 TCOF1Q13428 1488 aaKnown RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 PCSK5Q92824 1860 aa4.4□□□□□ -1.71
SAMM50-202ENST00000465768 INO80Q9ULG1 1556 aaPredicted RBP4.4□□□□□ -1.71
SAMM50-202ENST00000465768 CNTLNQ9NXG0 1405 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 RIMS1Q86UR5 1692 aaKnown RBP4.39□□□□□ -1.71
SAMM50-202ENST00000465768 FAM90A18PA6NE21 464 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 FAM90A16PA6NEW6 464 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 FAM90A9PA6NNJ1 464 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 LINC00473A8K010 186 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 FAM90A5PA8MXJ8 464 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 H0YIZ8 118 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 GCOM1H8Y6P7 765 aaPredicted RBP4.39□□□□□ -1.71
SAMM50-202ENST00000465768 IRAK2O43187 625 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 DNPH1O43598 174 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 ORC4O43929 436 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 TMPRSS11DO60235 418 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 TTLL1O95922 423 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 FGAP02671 866 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 FAM90A15PP0C7V4 464 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 FAM90A14PP0C7W9 464 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 HSD3B1P14060 373 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 ADRA1DP25100 572 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 ITPKBP27987 946 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 CST5P28325 142 aaPredicted RBP4.39□□□□□ -1.71
SAMM50-202ENST00000465768 MCM5P33992 734 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 PBX1P40424 430 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 PDE1AP54750 535 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 ARL4CP56559 192 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 AP2B1P63010 937 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 PPFIA1Q13136 1202 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 BIRC3Q13489 604 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 KCNJ12Q14500 433 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 HSP90AB4PQ58FF6 505 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 TMEM196Q5HYL7 178 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 FAM90A2PQ658T7 463 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 MSANTD2Q6P1R3 559 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 PCSK4Q6UW60 755 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 PIK3AP1Q6ZUJ8 805 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 PTCHD4Q6ZW05 846 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 PARS2Q7L3T8 475 aaKnown RBP4.39□□□□□ -1.71
SAMM50-202ENST00000465768 ZNF627Q7L945 461 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 TTC30AQ86WT1 665 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 SMAP1Q8IYB5 467 aaPredicted RBP4.39□□□□□ -1.71
SAMM50-202ENST00000465768 WDR60Q8WVS4 1066 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 OVCA2Q8WZ82 227 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 THAP7Q9BT49 309 aaPredicted RBP4.39□□□□□ -1.71
SAMM50-202ENST00000465768 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.39□□□□□ -1.71
SAMM50-202ENST00000465768 TOR3AQ9H497 397 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 MLXIPQ9HAP2 919 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 DUSP22Q9NRW4 184 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 DLL3Q9NYJ7 618 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 SRP68Q9UHB9 627 aaKnown RBP4.39□□□□□ -1.71
SAMM50-202ENST00000465768 PLXNC1O60486 1568 aa4.39□□□□□ -1.71
SAMM50-202ENST00000465768 MAST1Q9Y2H9 1570 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms