RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 LMNB2Q03252 620 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 SF3A2Q15428 464 aaKnown RBP21.07■□□□□ 0.96
COL2A1-203ENST00000465743 EXOC3L4Q17RC7 722 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 MIIPQ5JXC2 388 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 EOGTQ5NDL2 527 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 PRR23CQ6ZRP0 262 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 HMGB4Q8WW32 186 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 RLN3Q8WXF3 142 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 XPO6Q96QU8 1125 aaKnown RBP21.07■□□□□ 0.96
COL2A1-203ENST00000465743 MIS12Q9H081 205 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 CNGB3Q9NQW8 809 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 TAB2Q9NYJ8 693 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 CLEC4EQ9ULY5 219 aa21.07■□□□□ 0.96
COL2A1-203ENST00000465743 TNRC6BQ9UPQ9 1833 aaKnown RBP21.06■□□□□ 0.96
COL2A1-203ENST00000465743 BECN2A8MW95 431 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 GDF9O60383 454 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 PENKP01210 267 aaPredicted RBP21.06■□□□□ 0.96
COL2A1-203ENST00000465743 CISD3P0C7P0 127 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 CDK11BP21127 795 aaKnown RBP21.06■□□□□ 0.96
COL2A1-203ENST00000465743 GBP1P32455 592 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 DGKGP49619 791 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 KRT31Q15323 416 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 GPR161Q8N6U8 529 aaKnown RBP21.06■□□□□ 0.96
COL2A1-203ENST00000465743 FRMD1Q8N878 549 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 PLD4Q96BZ4 506 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 DLL3Q9NYJ7 618 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 CYTH4Q9UIA0 394 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 CNTN6Q9UQ52 1028 aa21.06■□□□□ 0.96
COL2A1-203ENST00000465743 HOXB2P14652 356 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 ZNF18P17022 549 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 TRIP4Q15650 581 aaPredicted RBP21.05■□□□□ 0.96
COL2A1-203ENST00000465743 CSRP2Q16527 193 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 ARHGAP44Q17R89 818 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 TCEAL6Q6IPX3 200 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 DHX40Q8IX18 779 aaKnown RBP21.05■□□□□ 0.96
COL2A1-203ENST00000465743 RNF139Q8WU17 664 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 TCEAL3Q969E4 200 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 FAM81BQ96LP2 452 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 DCLK3Q9C098 648 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 OLA1Q9NTK5 396 aaKnown RBP21.05■□□□□ 0.96
COL2A1-203ENST00000465743 BCCIPQ9P287 314 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL2A1-203ENST00000465743 RAD54BQ9Y620 910 aa21.05■□□□□ 0.96
COL2A1-203ENST00000465743 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.04■□□□□ 0.96
COL2A1-203ENST00000465743 A0A1W2PQF6 199 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 TSPAN3O60637 253 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 LRP3O75074 770 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 PNMA6AP0CW24 399 aaPredicted RBP21.04■□□□□ 0.96
COL2A1-203ENST00000465743 STILQ15468 1287 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 GEN1Q17RS7 908 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 HSF5Q4G112 596 aaPredicted RBP21.04■□□□□ 0.96
COL2A1-203ENST00000465743 KIAA1211LQ6NV74 962 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 ENOSF1Q7L5Y1 443 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 ZC3H10Q96K80 434 aaKnown RBP21.04■□□□□ 0.96
COL2A1-203ENST00000465743 SLC6A17Q9H1V8 727 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 VPS16Q9H269 839 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 SIX2Q9NPC8 291 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 ST7Q9NRC1 585 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 RXFP3Q9NSD7 469 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 ABCC13Q9NSE7 274 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 CACNA2D2Q9NY47 1150 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 LIMA1Q9UHB6 759 aaKnown RBP21.04■□□□□ 0.96
COL2A1-203ENST00000465743 CDV3Q9UKY7 258 aaKnown RBP21.04■□□□□ 0.96
COL2A1-203ENST00000465743 ZNF510Q9Y2H8 683 aa21.04■□□□□ 0.96
COL2A1-203ENST00000465743 MUC22E2RYF6 1773 aaPredicted RBP21.03■□□□□ 0.96
COL2A1-203ENST00000465743 THAP12O43422 761 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 LTFP02788 710 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 PON1P27169 355 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 GNA15P30679 374 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 MPLP40238 635 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 USP8P40818 1118 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 GPD2P43304 727 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 SGSHP51688 502 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 MFAP3P55082 362 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 PUM1Q14671 1186 aaKnown RBP eCLIP21.03■□□□□ 0.96
COL2A1-203ENST00000465743 USP39Q53GS9 565 aaKnown RBP21.03■□□□□ 0.96
COL2A1-203ENST00000465743 FKBP15Q5T1M5 1219 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 PMS2CLQ68D20 193 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 MSANTD2Q6P1R3 559 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 DGLUCYQ7Z3D6 616 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 FAM217AQ8IXS0 508 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 CHPFQ8IZ52 775 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 SCML4Q8N228 414 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 OLIG1Q8TAK6 271 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 HSD3B7Q9H2F3 369 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 POLMQ9NP87 494 aaPredicted RBP21.03■□□□□ 0.96
COL2A1-203ENST00000465743 APEX2Q9UBZ4 518 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 TJP2Q9UDY2 1190 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 FBXO10Q9UK96 956 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 STARD13Q9Y3M8 1113 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 HBS1LQ9Y450 684 aaKnown RBP21.03■□□□□ 0.96
COL2A1-203ENST00000465743 CEP192Q8TEP8 1941 aa21.03■□□□□ 0.96
COL2A1-203ENST00000465743 NCOR2Q9Y618 2525 aa21.02■□□□□ 0.96
COL2A1-203ENST00000465743 MED19A0JLT2 244 aaPredicted RBP21.02■□□□□ 0.96
COL2A1-203ENST00000465743 WASH3PC4AMC7 463 aa21.02■□□□□ 0.96
COL2A1-203ENST00000465743 ALDH1A2O94788 518 aa21.02■□□□□ 0.96
COL2A1-203ENST00000465743 GABRG2P18507 467 aa21.02■□□□□ 0.96
COL2A1-203ENST00000465743 NTSR1P30989 418 aa21.02■□□□□ 0.96
COL2A1-203ENST00000465743 CHKAP35790 457 aa21.02■□□□□ 0.96
COL2A1-203ENST00000465743 COPB1P53618 953 aaKnown RBP21.02■□□□□ 0.96
COL2A1-203ENST00000465743 ATXN1P54253 815 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms