RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PTPN9P43378 593 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 TUBP50607 506 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 SLC25A52Q3SY17 297 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 SH3PXD2AQ5TCZ1 1133 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 TXNDC8Q6A555 127 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 ITFG1Q8TB96 612 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 DQX1Q8TE96 717 aaKnown RBP17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 RNF139Q8WU17 664 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 GCNAQ96QF7 691 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 NPY6RQ99463 290 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 CNPY3Q9BT09 278 aa17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 MRPS23Q9Y3D9 190 aaKnown RBP17.62■□□□□ 0.41
EXOSC3-203ENST00000465229 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 DPYSL4O14531 572 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 COCHO43405 550 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 OAS1P00973 400 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 PSMA2P25787 234 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 SDC4P31431 198 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 CBX1P83916 185 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 TEAD2Q15562 447 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 PPP2R5EQ16537 467 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 C15orf59Q2T9L4 293 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 ATAT1Q5SQI0 421 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 C10orf120Q5SQS8 335 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 STXBP5Q5T5C0 1151 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 OTUD1Q5VV17 481 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 CES5AQ6NT32 575 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 MSANTD2Q6P1R3 559 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 UBL4BQ8N7F7 174 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 ADAM32Q8TC27 787 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 TBCBQ99426 244 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 RNF38Q9H0F5 515 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 WDR6Q9NNW5 1121 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 RRN3Q9NYV6 651 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 CALCOCO1Q9P1Z2 691 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 IP6K2Q9UHH9 426 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 DMGDHQ9UI17 866 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 MDM4O15151 490 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 TRUB2O95900 331 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 ATP5C1P36542 298 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 ATP11AP98196 1134 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 PIGHQ14442 188 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 MESDQ14696 234 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 CASP8Q14790 479 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 KLHDC10Q6PID8 442 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 POTEHQ6S545 545 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 BNIPLQ7Z465 357 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 IFT20Q8IY31 132 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 ARFGAP1Q8N6T3 406 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 MAB21L3Q8N8X9 362 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 EIF1ADQ8N9N8 165 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 SMRP1Q8NCR6 262 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 CENPIQ92674 756 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 CD101Q93033 1021 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 SLC22A12Q96S37 553 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 CYP2S1Q96SQ9 504 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 CDK5RAP1Q96SZ6 601 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 SLC46A2Q9BY10 475 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 SMOC2Q9H3U7 446 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 TRPC7Q9HCX4 862 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 GDF3Q9NR23 364 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 OLA1Q9NTK5 396 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 SFMBT1Q9UHJ3 866 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 STAP1Q9ULZ2 295 aa17.61■□□□□ 0.41
EXOSC3-203ENST00000465229 MYO16Q9Y6X6 1858 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 H3BQ06 376 aaPredicted RBP17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 M0QYT0 321 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 PROSCO94903 275 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 ENDOD1O94919 500 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 IGLV3-25P01717 112 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 CEBPBP17676 345 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 HDCP19113 662 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 FSHRP23945 695 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 CTNNA2P26232 953 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 SULT1E1P49888 294 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 EFEMP1Q12805 493 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 EIF4EBP2Q13542 120 aaPredicted RBP17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 SKIV2LQ15477 1246 aaKnown RBP17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 RAB6CQ53S08 254 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 GPR158Q5T848 1215 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 TADA2BQ86TJ2 420 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 TAC4Q86UU9 113 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 CPNE8Q86YQ8 564 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 NIPA2Q8N8Q9 360 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 ARL14EPQ8N8R7 260 aaPredicted RBP17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 AENQ8WTP8 325 aaKnown RBP17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 RAB6CQ9H0N0 254 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 ACBD3Q9H3P7 528 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 SLITRK6Q9H5Y7 841 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 UBE2ZQ9H832 354 aaPredicted RBP17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 DNMT3LQ9UJW3 386 aa17.6■□□□□ 0.41
EXOSC3-203ENST00000465229 TMEM110-MUSTN1A8MSY1 372 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 OLFM2O95897 454 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 GPS2Q13227 327 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 CBX2Q14781 532 aaPredicted RBP17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 CDO1Q16878 200 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 ARHGAP15Q53QZ3 475 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 STRADAQ7RTN6 431 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms