RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 NSL1Q96IY1 281 aa8.81□□□□□ -1
ACTB-208ENST00000464611 SNX27Q96L92 541 aa8.81□□□□□ -1
ACTB-208ENST00000464611 RMDN2Q96LZ7 410 aa8.81□□□□□ -1
ACTB-208ENST00000464611 TWNKQ96RR1 684 aa8.81□□□□□ -1
ACTB-208ENST00000464611 TINF2Q9BSI4 451 aa8.81□□□□□ -1
ACTB-208ENST00000464611 C11orf84Q9BUA3 381 aaPredicted RBP8.81□□□□□ -1
ACTB-208ENST00000464611 TRIM62Q9BVG3 475 aa8.81□□□□□ -1
ACTB-208ENST00000464611 MYLK2Q9H1R3 596 aa8.81□□□□□ -1
ACTB-208ENST00000464611 SNX25Q9H3E2 840 aa8.81□□□□□ -1
ACTB-208ENST00000464611 DCLRE1BQ9H816 532 aa8.81□□□□□ -1
ACTB-208ENST00000464611 CD248Q9HCU0 757 aa8.81□□□□□ -1
ACTB-208ENST00000464611 NGRNQ9NPE2 291 aaKnown RBP8.81□□□□□ -1
ACTB-208ENST00000464611 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.81□□□□□ -1
ACTB-208ENST00000464611 HCSTQ9UBK5 93 aa8.81□□□□□ -1
ACTB-208ENST00000464611 DCDC2Q9UHG0 476 aa8.81□□□□□ -1
ACTB-208ENST00000464611 MCM8Q9UJA3 840 aa8.81□□□□□ -1
ACTB-208ENST00000464611 GRID1Q9ULK0 1009 aa8.81□□□□□ -1
ACTB-208ENST00000464611 STAP1Q9ULZ2 295 aa8.81□□□□□ -1
ACTB-208ENST00000464611 GABRQQ9UN88 632 aa8.81□□□□□ -1
ACTB-208ENST00000464611 CHKBQ9Y259 395 aa8.81□□□□□ -1
ACTB-208ENST00000464611 PLLPQ9Y342 182 aa8.81□□□□□ -1
ACTB-208ENST00000464611 Q9Y3F1 56 aa8.81□□□□□ -1
ACTB-208ENST00000464611 SDR42E2A6NKP2 422 aa8.8□□□□□ -1
ACTB-208ENST00000464611 FAM159BA6NKW6 160 aa8.8□□□□□ -1
ACTB-208ENST00000464611 A8MXQ7 604 aa8.8□□□□□ -1
ACTB-208ENST00000464611 H3BRJ5 948 aa8.8□□□□□ -1
ACTB-208ENST00000464611 PIRO00625 290 aa8.8□□□□□ -1
ACTB-208ENST00000464611 LIN7AO14910 233 aaPredicted RBP8.8□□□□□ -1
ACTB-208ENST00000464611 XPO1O14980 1071 aaKnown RBP8.8□□□□□ -1
ACTB-208ENST00000464611 ALDH1A2O94788 518 aa8.8□□□□□ -1
ACTB-208ENST00000464611 HAUS5O94927 633 aa8.8□□□□□ -1
ACTB-208ENST00000464611 CD48P09326 243 aa8.8□□□□□ -1
ACTB-208ENST00000464611 GNAT1P11488 350 aa8.8□□□□□ -1
ACTB-208ENST00000464611 CYP2C9P11712 490 aa8.8□□□□□ -1
ACTB-208ENST00000464611 CYP2F1P24903 491 aa8.8□□□□□ -1
ACTB-208ENST00000464611 DNAJB1P25685 340 aa8.8□□□□□ -1
ACTB-208ENST00000464611 NOS2P35228 1153 aa8.8□□□□□ -1
ACTB-208ENST00000464611 HADHAP40939 763 aa8.8□□□□□ -1
ACTB-208ENST00000464611 MATKP42679 507 aa8.8□□□□□ -1
ACTB-208ENST00000464611 GLUD2P49448 558 aa8.8□□□□□ -1
ACTB-208ENST00000464611 TAF6P49848 677 aa8.8□□□□□ -1
ACTB-208ENST00000464611 ZBTB16Q05516 673 aa8.8□□□□□ -1
ACTB-208ENST00000464611 MGAT5Q09328 741 aa8.8□□□□□ -1
ACTB-208ENST00000464611 ILF2Q12905 390 aaKnown RBP8.8□□□□□ -1
ACTB-208ENST00000464611 PDK1Q15118 436 aa8.8□□□□□ -1
ACTB-208ENST00000464611 SLC25A52Q3SY17 297 aa8.8□□□□□ -1
ACTB-208ENST00000464611 KBTBD12Q3ZCT8 623 aa8.8□□□□□ -1
ACTB-208ENST00000464611 PPP1R26Q5T8A7 1209 aaPredicted RBP8.8□□□□□ -1
ACTB-208ENST00000464611 C9orf57Q5W0N0 161 aa8.8□□□□□ -1
ACTB-208ENST00000464611 STEAP4Q687X5 459 aa8.8□□□□□ -1
ACTB-208ENST00000464611 GPR153Q6NV75 609 aa8.8□□□□□ -1
ACTB-208ENST00000464611 PMF1Q6P1K2 205 aa8.8□□□□□ -1
ACTB-208ENST00000464611 FBXO46Q6PJ61 603 aaPredicted RBP8.8□□□□□ -1
ACTB-208ENST00000464611 PRUNE1Q86TP1 453 aa8.8□□□□□ -1
ACTB-208ENST00000464611 ZC3H18Q86VM9 953 aaKnown RBP8.8□□□□□ -1
ACTB-208ENST00000464611 LCA5Q86VQ0 697 aa8.8□□□□□ -1
ACTB-208ENST00000464611 FAM228AQ86W67 206 aa8.8□□□□□ -1
ACTB-208ENST00000464611 TMEM192Q8IY95 271 aa8.8□□□□□ -1
ACTB-208ENST00000464611 ZNF276Q8N554 614 aa8.8□□□□□ -1
ACTB-208ENST00000464611 PQLC3Q8N755 202 aa8.8□□□□□ -1
ACTB-208ENST00000464611 MAB21L3Q8N8X9 362 aa8.8□□□□□ -1
ACTB-208ENST00000464611 APPL2Q8NEU8 664 aa8.8□□□□□ -1
ACTB-208ENST00000464611 OR6B3Q8NGW1 331 aa8.8□□□□□ -1
ACTB-208ENST00000464611 PCDH19Q8TAB3 1148 aa8.8□□□□□ -1
ACTB-208ENST00000464611 NPLOC4Q8TAT6 608 aa8.8□□□□□ -1
ACTB-208ENST00000464611 TFB1MQ8WVM0 346 aaKnown RBP8.8□□□□□ -1
ACTB-208ENST00000464611 SREK1Q8WXA9 508 aaKnown RBP8.8□□□□□ -1
ACTB-208ENST00000464611 COPS5Q92905 334 aa8.8□□□□□ -1
ACTB-208ENST00000464611 C18orf25Q96B23 403 aaPredicted RBP8.8□□□□□ -1
ACTB-208ENST00000464611 ACSF2Q96CM8 615 aaPredicted RBP8.8□□□□□ -1
ACTB-208ENST00000464611 PPP1R2P1Q96PQ5 205 aa8.8□□□□□ -1
ACTB-208ENST00000464611 QKIQ96PU8 341 aaKnown RBP eCLIP8.8□□□□□ -1
ACTB-208ENST00000464611 PEBP4Q96S96 227 aa8.8□□□□□ -1
ACTB-208ENST00000464611 HNRNPABQ99729 332 aaKnown RBP8.8□□□□□ -1
ACTB-208ENST00000464611 BTBD10Q9BSF8 475 aa8.8□□□□□ -1
ACTB-208ENST00000464611 SNRNP25Q9BV90 132 aaKnown RBP8.8□□□□□ -1
ACTB-208ENST00000464611 TRIM6Q9C030 488 aaPredicted RBP8.8□□□□□ -1
ACTB-208ENST00000464611 WWP1Q9H0M0 922 aa8.8□□□□□ -1
ACTB-208ENST00000464611 ADAMTS10Q9H324 1103 aa8.8□□□□□ -1
ACTB-208ENST00000464611 MLXIPLQ9NP71 852 aa8.8□□□□□ -1
ACTB-208ENST00000464611 PDGFCQ9NRA1 345 aa8.8□□□□□ -1
ACTB-208ENST00000464611 SLC38A7Q9NVC3 462 aa8.8□□□□□ -1
ACTB-208ENST00000464611 SAE1Q9UBE0 346 aaPredicted RBP8.8□□□□□ -1
ACTB-208ENST00000464611 CHMP2BQ9UQN3 213 aa8.8□□□□□ -1
ACTB-208ENST00000464611 C15orf41Q9Y2V0 281 aa8.8□□□□□ -1
ACTB-208ENST00000464611 PCDHA11Q9Y5I1 949 aa8.8□□□□□ -1
ACTB-208ENST00000464611 SNX9Q9Y5X1 595 aa8.8□□□□□ -1
ACTB-208ENST00000464611 PTCH2Q9Y6C5 1203 aa8.8□□□□□ -1
ACTB-208ENST00000464611 RALGAPA2Q2PPJ7 1873 aa8.79□□□□□ -1
ACTB-208ENST00000464611 A0A0A0MRY4 1105 aa8.79□□□□□ -1
ACTB-208ENST00000464611 MBLAC1A4D2B0 266 aaPredicted RBP8.79□□□□□ -1
ACTB-208ENST00000464611 KPNA7A9QM74 516 aa8.79□□□□□ -1
ACTB-208ENST00000464611 PAPSS1O43252 624 aaPredicted RBP8.79□□□□□ -1
ACTB-208ENST00000464611 KPNA6O60684 536 aa8.79□□□□□ -1
ACTB-208ENST00000464611 HUS1O60921 280 aa8.79□□□□□ -1
ACTB-208ENST00000464611 DGKIO75912 1065 aa8.79□□□□□ -1
ACTB-208ENST00000464611 ANP32DO95626 131 aa8.79□□□□□ -1
ACTB-208ENST00000464611 F9P00740 461 aa8.79□□□□□ -1
ACTB-208ENST00000464611 VTNP04004 478 aa8.79□□□□□ -1
ACTB-208ENST00000464611 APRTP07741 180 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms