RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 MIS12Q9H081 205 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 POPDC2Q9HBU9 364 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 POLMQ9NP87 494 aaPredicted RBP16.97■□□□□ 0.31
SSNA1-204ENST00000464553 TLR6Q9Y2C9 796 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 MYO16Q9Y6X6 1858 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 PAPSS1O43252 624 aaPredicted RBP16.96■□□□□ 0.31
SSNA1-204ENST00000464553 FOXD2O60548 495 aaPredicted RBP16.96■□□□□ 0.31
SSNA1-204ENST00000464553 FYNP06241 537 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 RETP07949 1114 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 CDK11BP21127 795 aaKnown RBP16.96■□□□□ 0.31
SSNA1-204ENST00000464553 MESP2Q0VG99 397 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 C10orf76Q5T2E6 689 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 HEATR6Q6AI08 1181 aaKnown RBP16.96■□□□□ 0.31
SSNA1-204ENST00000464553 RASSF3Q86WH2 238 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 ZNF677Q86XU0 584 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 TMEM35BQ8NCS4 154 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 TSTD1Q8NFU3 115 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 FAM149B1Q96BN6 582 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 TMA16Q96EY4 203 aaKnown RBP16.96■□□□□ 0.31
SSNA1-204ENST00000464553 ZC3H10Q96K80 434 aaKnown RBP16.96■□□□□ 0.31
SSNA1-204ENST00000464553 VPS16Q9H269 839 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 ACP6Q9NPH0 428 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 TAB2Q9NYJ8 693 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 TMEM63CQ9P1W3 806 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 NCDNQ9UBB6 729 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 CYTH4Q9UIA0 394 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 GMEB2Q9UKD1 530 aa16.96■□□□□ 0.31
SSNA1-204ENST00000464553 SMTNL1A8MU46 457 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 E5RJQ4 531 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 CAPN9O14815 690 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 RPP40O75818 363 aaKnown RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 KLF8O95600 359 aaPredicted RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 SLC2A3P11169 496 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 ZNF18P17022 549 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 NTSR1P30989 418 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 CDH5P33151 784 aaPredicted RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 TIE1P35590 1138 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 SEC13P55735 322 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 TBX4P57082 545 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 KDSRQ06136 332 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 TYRO3Q06418 890 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 DMWDQ09019 674 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 BYSLQ13895 437 aaKnown RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 RAPGEF1Q13905 1077 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 EIF4HQ15056 248 aaKnown RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 USP39Q53GS9 565 aaKnown RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 C11orf57Q6ZUT1 292 aaPredicted RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 CEP68Q76N32 757 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 CACNA2D4Q7Z3S7 1137 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 SLC47A2Q86VL8 602 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 ALLCQ8N6M5 410 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 ZNF513Q8N8E2 541 aaPredicted RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 TXNDC5Q8NBS9 432 aaKnown RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 C1orf131Q8NDD1 294 aaKnown RBP16.95■□□□□ 0.3
SSNA1-204ENST00000464553 CLEC4CQ8WTT0 213 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 DDI1Q8WTU0 396 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 UCMAQ8WVF2 138 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 SLC39A13Q96H72 371 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 RRN3Q9NYV6 651 aa16.95■□□□□ 0.3
SSNA1-204ENST00000464553 PIK3R2O00459 728 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 ZBTB24O43167 697 aaPredicted RBP16.94■□□□□ 0.3
SSNA1-204ENST00000464553 HSF2BPO75031 334 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 LSM8O95777 96 aaKnown RBP16.94■□□□□ 0.3
SSNA1-204ENST00000464553 CYP11B1P15538 503 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 SCNN1AP37088 669 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 COPB1P53618 953 aaKnown RBP16.94■□□□□ 0.3
SSNA1-204ENST00000464553 EMC10Q5UCC4 262 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 TOGARAM2Q6ZUX3 1019 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 CCDC33Q8N5R6 958 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 ZNF397Q8NF99 534 aaPredicted RBP16.94■□□□□ 0.3
SSNA1-204ENST00000464553 DQX1Q8TE96 717 aaKnown RBP16.94■□□□□ 0.3
SSNA1-204ENST00000464553 PIWIL1Q96J94 861 aaKnown RBP16.94■□□□□ 0.3
SSNA1-204ENST00000464553 ERGIC2Q96RQ1 377 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 CPXM1Q96SM3 734 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 LSM14BQ9BX40 385 aaKnown RBP16.94■□□□□ 0.3
SSNA1-204ENST00000464553 PDCL3Q9H2J4 239 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSNA1-204ENST00000464553 SLC12A6Q9UHW9 1150 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 AJAP1Q9UKB5 411 aaPredicted RBP16.94■□□□□ 0.3
SSNA1-204ENST00000464553 NAALADL1Q9UQQ1 740 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 FHOD1Q9Y613 1164 aa16.94■□□□□ 0.3
SSNA1-204ENST00000464553 LGALS16A8MUM7 142 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 F8VZ95 297 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 SGK1O00141 431 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 ACSL4O60488 711 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 GBP1P32455 592 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 GABRB2P47870 512 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 CDK17Q00537 523 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 EIF4EBP2Q13542 120 aaPredicted RBP16.93■□□□□ 0.3
SSNA1-204ENST00000464553 NCAPHQ15003 741 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 RNF43Q68DV7 783 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 SLC26A9Q7LBE3 791 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 MSANTD4Q8NCY6 345 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 IPO4Q8TEX9 1081 aaKnown RBP16.93■□□□□ 0.3
SSNA1-204ENST00000464553 SLC2A13Q96QE2 648 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 HHIPQ96QV1 700 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 HINFPQ9BQA5 517 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 GANQ9H2C0 597 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 PLK2Q9NYY3 685 aa16.93■□□□□ 0.3
SSNA1-204ENST00000464553 SIK3Q9Y2K2 1263 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms