RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 BCAT1P54687 386 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 DYNC1I2Q13409 638 aaKnown RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 LAMC2Q13753 1193 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 TRMT5Q32P41 509 aaKnown RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 POTEAQ6S8J7 498 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 C16orf89Q6UX73 402 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 FAM183BPQ6ZVS7 135 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 TTC7BQ86TV6 843 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ADGRF2Q8IZF7 708 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 CLEC4FQ8N1N0 589 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ARHGAP18Q8N392 663 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 REPS2Q8NFH8 660 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 OR52K1Q8NGK4 314 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 CDRT15Q96T59 188 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 CDT1Q9H211 546 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ZDHHC18Q9NUE0 388 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ETNK2Q9NVF9 386 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 IGKV6D-41A0A0C4DH26 115 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 TPP1O14773 563 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ASS1P00966 412 aaKnown RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 RAG1P15918 1043 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 TSPAN8P19075 237 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 NCKAP1LP55160 1127 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 USP4Q13107 963 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 SPDYAQ5MJ70 313 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 WASHC2DQ5SRD0 308 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 SWT1Q5T5J6 900 aaKnown RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 GRAMD4Q6IC98 578 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 FOXR2Q6PJQ5 311 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 BBS12Q6ZW61 710 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
HPS4-208ENST00000464362 NRBF2Q96F24 287 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 SPATA17Q96L03 361 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ZBTB18Q99592 522 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ACSS3Q9H6R3 686 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 LATS2Q9NRM7 1088 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 DMAC2Q9NW81 257 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 FMN2Q9NZ56 1722 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 DCDC2Q9UHG0 476 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 GGA2Q9UJY4 613 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 MROH7Q68CQ1 1323 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 CCL15-CCL14A0A0B4J2E2 113 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ERI2A8K979 691 aaKnown RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 YDJCA8MPS7 323 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 FGFR3P22607 806 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 FDFT1P37268 417 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 TGFB2P61812 414 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 PTK2BQ14289 1009 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 CCL15Q16663 113 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 SPDYCQ5MJ68 293 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 BNC2Q6ZN30 1099 aaPredicted RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 PCDH20Q8N6Y1 951 aaKnown RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 PLEKHO2Q8TD55 490 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 NDRG1Q92597 394 aaKnown RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 PBXIP1Q96AQ6 731 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 OMDQ99983 421 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 FICDQ9BVA6 458 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 APOBEC3GQ9HC16 384 aaKnown RBP9.33□□□□□ -0.92
HPS4-208ENST00000464362 THAP1Q9NVV9 213 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 CCDC167Q9P0B6 97 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 ACOT9Q9Y305 439 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 USP54Q70EL1 1684 aa9.33□□□□□ -0.92
HPS4-208ENST00000464362 PRR5-ARHGAP8B1AHC4 643 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 ADM5C9JUS6 153 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 TNPO2O14787 897 aaKnown RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 ALOX15BO15296 676 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 LRCH4O75427 683 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 NDUFS3O75489 264 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 SLC25A27O95847 323 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 NFKBIAP25963 317 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 MAPK10P53779 464 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 ARHGAP8P85298 464 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 TWF1Q12792 350 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 OASLQ15646 514 aaKnown RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 SV2CQ496J9 727 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 RNF43Q68DV7 783 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 CLNKQ7Z7G1 428 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 GPRC5AQ8NFJ5 357 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 DNAJB3Q8WWF6 145 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 TFAP2BQ92481 460 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 MFSD14AQ96MC6 490 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 SEPT5Q99719 369 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 SEMA6AQ9H2E6 1030 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 CCDC134Q9H6E4 229 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 MAP3K20Q9NYL2 800 aaKnown RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 MED1Q15648 1581 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 RGPD2P0DJD1 1756 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 DISP2A7MBM2 1401 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 STMN1P16949 149 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 GP5P40197 560 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 ADCYAP1R1P41586 468 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 WDR4P57081 412 aaKnown RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 CYLC2Q14093 348 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 NRF1Q16656 503 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 FNBP1LQ5T0N5 605 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 CHSY1Q86X52 802 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 PHF13Q86YI8 300 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 ANKRD13AQ8IZ07 590 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 GIPC2Q8TF65 315 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 GDPD5Q8WTR4 605 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms